Gene Information

Name : PAGR_g3846 (PAGR_g3846)
Accession : YP_005994554.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Unknown
Product : conjugative transfer region lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4182644 - 4183060 bp
Length : 417 bp
Strand : -
Note : -

DNA sequence :
ATGCATCAGTGTAAACCTCTGGCGGCGCTGGCACTGGCTGGTTTGACCGCGCTGATGCTCAGTGGCTGCAGCACCTCCAA
AGATGAAATGCTGCCCCCCGGTGACAGCACCATGCTGGAGCTCTGGAACAACGGCGCATCCACCACGCACGCCACCGCTG
AAAGCCGCACCACGCTGCGCCGGCCGGTCTCCGACAGCGAACGCACGATCGGACAACAGACCCGGGACAGCTACAGCCGC
ACCCAGGAAAATGAAATTCAGCAGACGTTTCCGCGCCTGCCCAATCCGGACATGGTGATGTATGTGTTTCCGCATCTGGC
CGACGGCAATACGCCGGTGCCGGGCTACAGTACCGTGTTCCCGTTTTACAGCCAGGTGCAGTATGCGCTGCCCGGCGAAC
GCACGGAGGCGCTGTAA

Protein sequence :
MHQCKPLAALALAGLTALMLSGCSTSKDEMLPPGDSTMLELWNNGASTTHATAESRTTLRRPVSDSERTIGQQTRDSYSR
TQENEIQQTFPRLPNPDMVMYVFPHLADGNTPVPGYSTVFPFYSQVQYALPGERTEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 4e-40 71
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 4e-40 71
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 6e-36 68
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 2e-35 67
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 3e-34 67
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 1e-34 59
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-31 54
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 8e-31 53
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 2e-28 53
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 1e-27 51
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-27 49
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 2e-22 47
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 8e-26 45