Gene Information

Name : PAGR_g3838 (PAGR_g3838)
Accession : YP_005994546.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4170877 - 4171284 bp
Length : 408 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATCCCCCTCTGCAGTCTTGCCGTCCTGTTCCTTAGCGCAGGTGCCCACGCCGGCACCGTGATTTACACCGACCA
TGCGCACCCCGTTAGCGGCGAACTGAGTCCCGACGTCACCGTGACCGAGCTGGACGCGCCCGATCGCCTCCAGGCTGAAC
TCTTTGGACCGCTCTCCGCTAACCCGGCGCAGGCCGGGCAGCAGGCCCGGGCTGTCATCGCCTCACCGGCGTTCCGCCAG
AATCAGCAGGCCTTAGCGGCGAGCTATGCCGGTGTCGCACATGCCTGGTCGCTGGGGCTGGAAAAGTACCCAGCAGTGGT
ATTCGACGATAAATGGGTGGTGTACGGCACAACCGACGTCGCCGCAGCCCGGGCGAAACTGGATGCCTGGCGGGAGAAAC
AGCCGTGA

Protein sequence :
MKIPLCSLAVLFLSAGAHAGTVIYTDHAHPVSGELSPDVTVTELDAPDRLQAELFGPLSANPAQAGQQARAVIASPAFRQ
NQQALAASYAGVAHAWSLGLEKYPAVVFDDKWVVYGTTDVAAARAKLDAWREKQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAX39457.1 unknown Not tested Hrp PAI Protein 4e-45 73
api53 CAF28527.1 hypothetical protein Not tested YAPI Protein 6e-30 56
YpsIP31758_3702 YP_001402656.1 hypothetical protein Not tested YAPI Protein 8e-30 56
STY4575 NP_458660.1 hypothetical protein Not tested SPI-7 Protein 9e-19 48
t4272 NP_807870.1 hypothetical protein Not tested SPI-7 Protein 9e-19 48
EXA21 ABD94630.1 conserved hypothetical protein Not tested ExoU island A Protein 5e-10 43
RL018 AAP84145.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-10 43
unnamed ABR13358.1 hypothetical protein Not tested PAGI-5 Protein 5e-10 42
ORF SG52 AAN62274.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-14 41