Gene Information

Name : PAGR_g3836 (PAGR_g3836)
Accession : YP_005994544.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4168482 - 4169897 bp
Length : 1416 bp
Strand : -
Note : -

DNA sequence :
ATGAAGAATTTCAGCGTTAAAAAACTGCGCGTGGCCACGGGCGCGCTTTTGCTTGCCTCGGCGATGCCGGCACTGGCCAT
CGATACCACGCTTTCCTCACAGGGGGCCGGCGTCAGCGGCGCCATCAACGACGGGCTTTTCTATTCCATCGGCGGCGGCT
CGGTCATTTCGCCGCCCTCAACGCGCAGCAACATGTCACGGCTCGGCCTGGACGGCGGCTGGAGCAGTGATTTGATGTGC
GGCAACTTCGACCTGAAAACCACCGTCGGTAACCAGCTCAACGGCATCACCAGCGGATTCAAGGACCTGATGGGTAACGT
CATTCAGGGCGCGACTGGCGCGGTGATGAGTATGCCGGCAATGGCCATTCAGCGTGCCAATCCGGGTCTGTATGAAATGC
TGACCAACGGCGTGCTGCAGGCGGGCCTGAACTTCGACAAGGCCCAGCTCAACTGCCAGAACATGTCGAAAAAGCTGGCC
GACTACACGCTGGGCAGCAAGTGGCAGCAGGCGGCCGTGTCAGAAGAGTATAAAGACATCGTGGCATCGAGCGGCGGTGA
TGCGGTATCGAGCGACCAGAAGCTGCAGAAGGCCACGGGTGAAGAAGGTGTGACCTGGGTCGGTGGCCAGAAACGCGGCG
GCAAGGGACAGCCGGCGATTCAGCCCACGCGCGACCTGGCAAAAGCCGGCTACAACATGATGAACAGCCTGCCGGTAAAC
AGCAACAGCAGCGTCGGCTCGGCCAGCTGTAACGGTACGGTCTGCCAGCGCTACAAATCCTCCGATGAAGCCGCTGCGGC
CGTTGTTAAGGTCCTCGGCGATCGCTCTATCCGCACCTGCCGTGAAACCAGCGAATGCACCAGCGGCGGCGCGGATAACC
AGCCGGGCAGCACCGTTGCCGGCACCGGCTTTTCGCCAGTACTGGAAGACGCCACCAAAACCAACCTGGAGCAGCTCAGC
AAACTGGTTAACGGTCAGCTGCAGCCCACGGCCGATAATCTGGCCGCGCTCAAAACCGGCAGCCTAGTTGTCACGCGCGG
CGTGATTCAGGCGCTGCGCGATGATCCGGACCGGGCCGCACTGGTGCAGCGACTGGCGGGTGAACTGGCCATGTCTGACA
CGGTTGAGGCGGCACTCACCATGCGCCGCATGCTGACGACCGGTGAGTCTGAACCGAACGCGGCCGAACAGCCTGAGGCC
ATCGCCGAAGGTGACCGCCGCGTGGATGCGCTCGACCGCGAACTGAACGCGCTGCGTAACGAGATGGAGCTGCGCAAGTC
CATCAGCAGCAACAGCCTGCTCACCACGCTTGAGCGCCAGGGCGAACGCAATCAGGACAACCAGCTGCAGCAGAAAACCG
GCAATCAGGACCAGGGTTTCAGCCAGATGAGCCAGCCTCAGCCGGGAGGCAACTGA

Protein sequence :
MKNFSVKKLRVATGALLLASAMPALAIDTTLSSQGAGVSGAINDGLFYSIGGGSVISPPSTRSNMSRLGLDGGWSSDLMC
GNFDLKTTVGNQLNGITSGFKDLMGNVIQGATGAVMSMPAMAIQRANPGLYEMLTNGVLQAGLNFDKAQLNCQNMSKKLA
DYTLGSKWQQAAVSEEYKDIVASSGGDAVSSDQKLQKATGEEGVTWVGGQKRGGKGQPAIQPTRDLAKAGYNMMNSLPVN
SNSSVGSASCNGTVCQRYKSSDEAAAAVVKVLGDRSIRTCRETSECTSGGADNQPGSTVAGTGFSPVLEDATKTNLEQLS
KLVNGQLQPTADNLAALKTGSLVVTRGVIQALRDDPDRAALVQRLAGELAMSDTVEAALTMRRMLTTGESEPNAAEQPEA
IAEGDRRVDALDRELNALRNEMELRKSISSNSLLTTLERQGERNQDNQLQQKTGNQDQGFSQMSQPQPGGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 1e-176 88
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 3e-157 78
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 2e-157 78
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 2e-156 78
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 1e-136 66
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 1e-136 66
PMI2572 YP_002152291.1 hypothetical protein Not tested Not named Protein 3e-126 61
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-71 43
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-68 43
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 1e-69 42
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 9e-71 42
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-71 41