Gene Information

Name : PAGR_g3747 (PAGR_g3747)
Accession : YP_005994456.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase KdsD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4075338 - 4076324 bp
Length : 987 bp
Strand : +
Note : -

DNA sequence :
ATGTCATATCAGCAACCAACGGTAAATTTTGATTTTCAGAAAGCCGGTAAAACGGTATTACGCATCGAGCGCGAAGGCCT
GGAGCAGCTTGATCAATATATTAATGAGGCTTTCGCCGACGCCTGCGCACTGATTTATGCCTGTCAGGGAAAAGTGGTGG
TCATGGGAATGGGCAAGTCGGGCCATATCGGGAAAAAAATGGCGGCCACCTTTGCCAGCACCGGCACGCCGGCGTTCTTT
GTGCATCCCGCTGAAGCCAGCCATGGCGATCTTGGCATGGTAGGTAAAGACGATGTCGTCATCGCGATATCTAACAGTGG
CGAATCCAGTGAGATTTTGGCGCTGATACCGGTAATGAAACGCCAAAAGATTCCGTTGATCTGTATGACAAGCCGTCCTG
AAAGCGCCATGGCCCGCGCCGCAGATATCCACCTGTGCGTGAAAGTCCCACAGGAGGCCTGTCCGCTCGGCCTGGCCCCC
ACCACCAGCACAACCGCAACGCTGGTCATGGGCGATGCGCTGGCCGTTTCCCTGCTGGAAGCCCGCGGCTTTACGCCAGA
AGACTTTGCCTTGTCCCATCCGGGCGGTGCGCTGGGCCGGAAGCTGCTGCTACACGTCAGCGACATTATGCACAGCGGGG
ATGAACTCCCGCACGTCACTCGCGATGCTTCCCTGCGTGATGCCCTGCTGGAAATTACCCGTAAAAATCTCGGCCTGACG
GTTATCGTGGACGATCTGATGAAGATCGAGGGCATCTTTACCGATGGTGACCTGCGCCGCATCTTTGATATGGGCATTGA
TTTTCAACACGCCACTATCGCTGAAGTCATGACCCGGGGTGGCATTCGCGTGCGGCCTAACGTGCTGGCGGTGGATGCGC
TGAATTTGATGCAAACCAAAAACATTACTTCCCTGCTGGTGGCCGATGACGACCGTCTGTTGGGTGTGGTACATATGCAT
GACATGCTGCGCGCTGGCGTAGTGTAA

Protein sequence :
MSYQQPTVNFDFQKAGKTVLRIEREGLEQLDQYINEAFADACALIYACQGKVVVMGMGKSGHIGKKMAATFASTGTPAFF
VHPAEASHGDLGMVGKDDVVIAISNSGESSEILALIPVMKRQKIPLICMTSRPESAMARAADIHLCVKVPQEACPLGLAP
TTSTTATLVMGDALAVSLLEARGFTPEDFALSHPGGALGRKLLLHVSDIMHSGDELPHVTRDASLRDALLEITRKNLGLT
VIVDDLMKIEGIFTDGDLRRIFDMGIDFQHATIAEVMTRGGIRVRPNVLAVDALNLMQTKNITSLLVADDDRLLGVVHMH
DMLRAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-47 42
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-47 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 4e-47 42