Gene Information

Name : PAGR_g3657 (PAGR_g3657)
Accession : YP_005994366.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : type III restriction enzyme, res subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3971560 - 3974577 bp
Length : 3018 bp
Strand : +
Note : -

DNA sequence :
ATGGTTAGTCAAACCAATGAACAAGCATTAGAGTCAACCATTGAAAAATGTTTGGTAGGTATCAGTGCTGAAGAGCTTAA
AGGTGGCCTAAGCCCCCAGTTCTCCGGTACAGGGTATGTCATTGGTGCTTCTAGTGACTTTAATATGCAATATGCCATTG
ATGAGCGTTTTTTCTGGAAATTTCTAGAAAAGACACAGGAAGCTGAACTGACTAAATTACAAAAAAATAATCCAGCAGAT
TGGCAACGCAAGTTATTGGAACGGTTTGATCGACTCATCAAAAAGCACGGTATTTTGCACGTACTCAAGAAAGGCCTGAG
TGTAGATGATGCCCATTTTATTTTGCTCTATCCGGCACCACTAGCGAGCAGTAGCGAGAAGGTAAAGCAAAACTTTGCTG
ATAACGTTTTTAGTTGTACCAGGCAGGTACGTTACTCGGTAGCGAATCCTTTACAAGAAATAGACATGGTGTTGTTCATC
AACGGTATACCGTTGATCACCTTGGAGTTAAAAAATGCCTGGACGGGACAAACGGCTCGCTACCATGGGCAAAAGCAATA
TCGTGACGATCGTGATGCTACTCAGCCATTACTGACCTTTGGTCGTTGTCTGGTGCATATGGCAGTGGATACGGACGAGG
TCTATATGACCACGAAGTTGGCGGGAAAAAATACATTTTTCTTGCCGTTCAATAAAGGGCACAATCTTGGCCAAGGTAAT
CCCCCTAACCCAGCTGGCCACAAAACGGCATATCTATGGCAAGAGATATTCACCAAAGAAAGCCTGGCCAACATCATTCA
ACACTTTGTCCGTCTGGATGGCACAAGCAAAGAGCCATTACCGAAGCGAACCTTGTTTTTCCCTCGATACCACCAACTAG
ATGTTGTCAGAAAATTGGTCGATCATGCTGCCACTCATGGCGTTGGCCAGACATATTTAATTCAACACTCGGCTGGTTCT
GGTAAGTCTAATTCAATTACCTGGGCTGCCTATCAGCTTATTGAGACCTATCCTGCTACCGAATCTGAGGCAGGTGGTAA
AAGCTTGGAGCAGCCTTTATTCGACTCTGTGATTGTCGTGACTGACAGACGCCTGTTGGATAAGCAATTGCGGGATAATA
TTAAAGAGTTCTCAGAGGTAAAAAATATTATTGCCCCTGCGCACAAATCATCTGAGCTTAAGCAAGCACTTGAAAACGGC
AAGAAAATCATAATTACGACGATTCAAAAATTTCCGTTTATCATTGATGGTATTGCCGATCTGAGTGATAAGCGTTTCGC
CGTGATCATCGATGAGGCACACAGTTCTCAGTCAGGTTCAGCGCATGACAATATGAACCGAGTAATGGGTAAGGCTGGAG
TTGAAGAGGCTGAAGATGCTCAGGATAAAATTCTTCAGGCAATGAAGTCGCGTAAAATGCGAGGTAATGCATCGTATCTG
GCGTTTACTGCAACGCCGAAAAACAGCACGCTAGAAAAATTTGGAGAGCGTCAGGAAGATGGTGCATTTAAACCCTTACA
TCTTTACTCGATGAAACAAGCGATAGAAGAAGGTTTTATTCTGGACGTGCTTGCCAATTATACGACTTACAAAAGCTATT
ATGAGATTGAAAAATCGATAGCTGACAACCCAGAGTTCGATACTAAAAAAGCCCAGAAAAAACTTAGAGCCTATGTTGAA
CGTAGTCAGCAGACTATTGATACGAAGGCAGAGATCATGCTGGAGCATTTTGTGCCTCACGTGGTAAATGCGAAAAAGCT
CAAAGGTAAAGGAAAAGGGATGGTAGTAACTCAAAACATTGAGACTGCCATTCGATACTACAAAGCCATCAAACGTATAC
TTGAAGAACAAAGCAACCCATTTAAAATTCTGATTGCATTCTCGGGTACGAAAGAAGTTGATGGGATTGAGTACACTGAA
GCCGATATCAATGGCTTTGCCGAAACTGATACTAAAGATATGTTTGACACTGATGAATATCGACTTTTAGTCGTCGCCAA
CAAATATCTCACCGGATTCGACCAGCCAAAGCTTTGTGCGATGTATGTGGATAAAAAGCTAGCGAGCGTCTTGTGTGTGC
AAGCATTGTCGCGACTCAATCGTAGTGCACCCAAGTTGGGAAAGAAAACAGAGGATTTGTTTATACTGGATTTCTTCAAT
TCTGTTGAAGATATTCAGTTAGCATTTGATCCGTTTTATACAGCCACATCTTTGTCGCAAGCCACCGATATTAATGTGCT
GCATGAGTTAAAAGACGAAATGGATGATGTGGGGGTCTATGAGTGGCTTGAAATTGAAGAGTTTGTAATTCGTTACTTTA
ATAATGAGGATGCCCAGACTCTCAGCCCGATAATCGATGTTGCAGCAGCTCGTTTTGACTATGAGTTAGAACTCGAACCT
GAAGCTAAAGTTGATTTCAAAATTAAAGCCAAACAATTCGTGAAAATCTATGGGCAAATGGCCTCTATCATGCCTTATGA
GATGGTGACTTGGGAGAAACTGTTCTGGTTCTTGAAATTCCTCATACCTAAGCTGAAAGTTGAAGACCCTGATGCAGATG
CCATTGATGAGCTTTTAGATTCTGTTGATTTGAGTTCCTATGGGCTGCAGCGTGTGAAGCTCAATCACACAATCAAGTTG
AGCGATGAGGAAGCGGAGCTTGATCCACAAAACCCAAACCCACGTGGAGCACATAGCAGTGAAAAGGAAAAAGATCCATT
AGACGAAATAATCCGTACCTTCAATGAGAGGTGGTTCCAAGGGTGGAGTGCTACGCCTGAAGAGCAGAAAGTGAAGTTTA
TAAACATTGCTGAGAGCATTCGTAATCACCCTGATTTTGAGACTAAGTATAGAAATAATCCTGATCCACATAACAGAAAC
TTGGCTTTTGAAAAGATGCTCAAAGAGATTATGTTGCAACGACGTAAGGATGAGCTGGAGCTTTATAAGCTGTTTGCAGG
AGACTCAGCATTCAAAGCATCCTGGACACAAAGCATGCAACGAATGATCGGTGAGTAA

Protein sequence :
MVSQTNEQALESTIEKCLVGISAEELKGGLSPQFSGTGYVIGASSDFNMQYAIDERFFWKFLEKTQEAELTKLQKNNPAD
WQRKLLERFDRLIKKHGILHVLKKGLSVDDAHFILLYPAPLASSSEKVKQNFADNVFSCTRQVRYSVANPLQEIDMVLFI
NGIPLITLELKNAWTGQTARYHGQKQYRDDRDATQPLLTFGRCLVHMAVDTDEVYMTTKLAGKNTFFLPFNKGHNLGQGN
PPNPAGHKTAYLWQEIFTKESLANIIQHFVRLDGTSKEPLPKRTLFFPRYHQLDVVRKLVDHAATHGVGQTYLIQHSAGS
GKSNSITWAAYQLIETYPATESEAGGKSLEQPLFDSVIVVTDRRLLDKQLRDNIKEFSEVKNIIAPAHKSSELKQALENG
KKIIITTIQKFPFIIDGIADLSDKRFAVIIDEAHSSQSGSAHDNMNRVMGKAGVEEAEDAQDKILQAMKSRKMRGNASYL
AFTATPKNSTLEKFGERQEDGAFKPLHLYSMKQAIEEGFILDVLANYTTYKSYYEIEKSIADNPEFDTKKAQKKLRAYVE
RSQQTIDTKAEIMLEHFVPHVVNAKKLKGKGKGMVVTQNIETAIRYYKAIKRILEEQSNPFKILIAFSGTKEVDGIEYTE
ADINGFAETDTKDMFDTDEYRLLVVANKYLTGFDQPKLCAMYVDKKLASVLCVQALSRLNRSAPKLGKKTEDLFILDFFN
SVEDIQLAFDPFYTATSLSQATDINVLHELKDEMDDVGVYEWLEIEEFVIRYFNNEDAQTLSPIIDVAAARFDYELELEP
EAKVDFKIKAKQFVKIYGQMASIMPYEMVTWEKLFWFLKFLIPKLKVEDPDADAIDELLDSVDLSSYGLQRVKLNHTIKL
SDEEAELDPQNPNPRGAHSSEKEKDPLDEIIRTFNERWFQGWSATPEEQKVKFINIAESIRNHPDFETKYRNNPDPHNRN
LAFEKMLKEIMLQRRKDELELYKLFAGDSAFKASWTQSMQRMIGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 78
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 78
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g3657 YP_005994366.1 type III restriction enzyme, res subunit VFG1098 Protein 0.0 78