Gene Information

Name : PAGR_g3651 (PAGR_g3651)
Accession : YP_005994362.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Unknown
Product : putative IS911 transposase orfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3965496 - 3966335 bp
Length : 840 bp
Strand : -
Note : -

DNA sequence :
GTGGTCACACTTTGCCACGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGGAAAAAAGCCCCGAAAAGCCAGACGG
CAGGCGAGCGGTGTTACGCAGTCAGGTTCTGGAACTGCATAACATCAGCCATGGCTCTGCTGGCGCAAGAAGTATCGCGA
TTATGGCAACCCTGAGAGGCTTCAGAATGGGACGCTGGCTTGCCGGCAGGCTCATGAAAGAACTGGGGCTGGTGAGTTGT
CAGCAACCTACCCACCGGTATAAACGTGGTGGTCATGAACACATCGTTATCCCGAATCACCTTGAGCGACAGTTCGCAGT
GACAGAGCCTAATCAGGTATGGTGCGGCGATGTGACGTATATCTGGACAGGCAAGCGTTGGGCTTACCTCGCTGTTGTTC
TCGATCTGTTCGCAAGAAAACCGGTGGGCTGGGCAATGTCATTCTCACCGGACAGCAGGCTGACCATCAAAGCACTGGAA
ATGGCGTGGGAAACTCGCGGTAAACCAGCCGGAGTGATGTTCCACAGTGACCAGGGTAGCCACTATACAAGCAGGCAGTT
CCGGCAGTTACTGTGGCGTTGCCGGATCAGGCAGAGTATGAGCCGACGTGGAAACTGTTGGGACAACAGCCCGATGGAAC
GCTTCTTCAGAAGTCTGAAAAACGAGTGGGTGCCAGTGACAGGTTATATAAACTTTAGCGAAGCTGCACATGCGATCACA
GACTATATCGTCGGGTATTACAGCTCGCTAAGGCCGCATGACTATAACGGTGGGTTACCCCCAAACGAATCGGAAAACCG
ATACTGGAAAAACTCTAAAGCGGTGGCCAGTTTTAGTTGA

Protein sequence :
MVTLCHVFGVHRSSYKYWEKSPEKPDGRRAVLRSQVLELHNISHGSAGARSIAIMATLRGFRMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHIVIPNHLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTIKALE
MAWETRGKPAGVMFHSDQGSHYTSRQFRQLLWRCRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPVTGYINFSEAAHAIT
DYIVGYYSSLRPHDYNGGLPPNESENRYWKNSKAVASFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-99 92
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-99 92
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-93 68
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-93 68
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-93 68
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-93 68
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-93 68
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-93 68
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-93 68
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-93 68
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-66 63
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-66 63
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-68 63
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-68 63
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 3e-71 63
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-67 62
Z5089 NP_290241.1 transposase Not tested LEE Protein 3e-67 62
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 6e-63 55
tnpB CAB61574.1 transposase B Not tested HPI Protein 1e-37 42
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 1e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g3651 YP_005994362.1 putative IS911 transposase orfA VFG1484 Protein 6e-100 92
PAGR_g3651 YP_005994362.1 putative IS911 transposase orfA VFG1122 Protein 1e-93 68
PAGR_g3651 YP_005994362.1 putative IS911 transposase orfA VFG0785 Protein 1e-67 62