Gene Information

Name : PAGR_g3628 (PAGR_g3628)
Accession : YP_005994340.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : ribokinase RbsK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3943770 - 3944978 bp
Length : 1209 bp
Strand : -
Note : -

DNA sequence :
ATGATGTTTCTGGAAGAACGACGCAATCAAATTTTGCAATGGCTGGACGAACATGAACGCGTCACTGTTAACGGGCTGGC
GAGCCAGTTGCGTGTTACTCGGGAGACGATTCGCACCGATCTGCGTGCGCTGGCAGAGCAGGGGCTGGTTCAGCGCTGCT
ACGGCGGTGCCATAGTGCAACGCCGTAATCTGCAGGAAAAGCTCATCAGCGAAAGTGGCCATTTTGATGTTTTACTCAAG
CGGTTGCAGGCGCGTAAAACCACCGTAAAGACCACCAGCAGGCAGGGAAAAGTCTGCATCCTTGGCGCATTCAATGTTGA
TATCGTCGCCAGGGTGGCGCGTTTTCCGCAAAGTGGTGAATCGCTGATGGCGCAAGGCAGCACACTCGGGCCCGGCGGCA
AGGGGGCCAATCAGGCCATGGCCGCCAGCCGGGCCGGAGCGCGCGTCCATTTTGTTGCCAAGGTCGGAACCGATCGGTTC
AGCCAGTTTGCGTTTGATCACCTTTCGTCATCGGACATTCACTCTTTCCGTTTATACCAGACGGATACCGAACCCACAGG
CAGCGCCATCATTTATGTCTCGCAGGAAAACGGCGAGAACATGATTGCCATCTACCCCGGTGCCAATAAAACCCTGACGG
ATGCCGAAATTGCCGAGCTGACCCATGAACTCACCGATGCGGATGTGTTGTTACTGCAGCTGGAAAACAACGTCGAGGCC
ACGCGCAGCGCTATCCGGCTGGCACATGCACTGGGCGTCCGCATCATCATGAACCCGGCGCCGTTCTCGTCTGAGGTCGT
GAACGTTCTGCCGATGATCGATGTGCTGACGCCCAACGAAACCGAGGCCTCGCGGCTCTCGGGCATTGAAATCTGTGACA
TGGCGAGTGCGCGTAAGGCGGCGCAGGCGATTGTGGCGCAGGGGGCGCAGCGAGTGATCATCACCATGGGCGCGCGCGGC
GCGCTGCTGTTCGATGCGCCGCACTGTCACGTCATTCCTGCCTTTCCTGCGCTCAGCGTGGACACCACCGGCGCGGGCGA
TGCCTTTAACGGCGCGCTGGCCGCCGCGCTGGCGCAGGGGCAGCCGTTACTGCAGGCCGCCACATGGGCATCGGCCTTTG
CGTCCCTGGCCGTAGAGCGGGAAGGCGCAAGCAATATGCCCAAGCGGCATCAGGTCATCACCCGACTTAACCAACGTAAT
CCGACGTAA

Protein sequence :
MMFLEERRNQILQWLDEHERVTVNGLASQLRVTRETIRTDLRALAEQGLVQRCYGGAIVQRRNLQEKLISESGHFDVLLK
RLQARKTTVKTTSRQGKVCILGAFNVDIVARVARFPQSGESLMAQGSTLGPGGKGANQAMAASRAGARVHFVAKVGTDRF
SQFAFDHLSSSDIHSFRLYQTDTEPTGSAIIYVSQENGENMIAIYPGANKTLTDAEIAELTHELTDADVLLLQLENNVEA
TRSAIRLAHALGVRIIMNPAPFSSEVVNVLPMIDVLTPNETEASRLSGIEICDMASARKAAQAIVAQGAQRVIITMGARG
ALLFDAPHCHVIPAFPALSVDTTGAGDAFNGALAAALAQGQPLLQAATWASAFASLAVEREGASNMPKRHQVITRLNQRN
PT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 1e-67 51
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 4e-67 50
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 3e-67 50
APECO1_1076 YP_853096.1 carbohydrate kinase Not tested PAI IV APEC-O1 Protein 1e-60 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g3628 YP_005994340.1 ribokinase RbsK VFG0483 Protein 2e-67 50