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Name : PAGR_g3389 (PAGR_g3389) Accession : YP_005994101.1 Strain : Pantoea ananatis PA13 Genome accession: NC_017554 Putative virulence/resistance : Virulence Product : lysine decarboxylase LdcC Function : - COG functional category : - COG ID : - EC number : - Position : 3648255 - 3650402 bp Length : 2148 bp Strand : - Note : - DNA sequence : TTGAATATTCTGGCGATCATGGGCGCGCATGGCGTGTTTTACAAAGATGAACCCTTGCGCGAACTGGAAGTCGCGCTGAG TCAGCAAGGTTTTCAACTCATCCGGCCGAAAAACAATGACGATCTGCTAAAACTCATTGAACACAATCCCCGTATCAGCG GCGTCATTTTTGACTGGGATGAACACAACAGCCCGGAGCTGTGTGGTGAAATCAATCAGCTTAATGAATACCTGCCGCTG TATGCCTTTATCAATACCCATTCCCAGATGGATATCAGTATCAATGAAATGCGTATGCCGCTGCATTTCTTTGAATATGC GCTGAATGCCGCCGACGATATTGCTCTTCACATCCGACAGTACACAGATGACTACCTCGACAACATCACGCCGCCGTTGA CCAAAGCGTTGTTTACCTATGTGAAAGAGGGGAAATACACCTTCTGTACCCCAGGCCATATGGCCGGTACGGCCTTCCAG AAAAGCCCGGTCGGCTGCTTGTTCTATGACTTTTTTGGTGCCAATACGCTGAAGTCGGATATCTCGATTTCGGTAACGGA ACTGGGATCGCTGCTGGACCACACAGGGCCGCATCTGGAAGCCGAGGAGTATATCGCCCGCACTTTTGGTGCGGAACAGA GCTACATGGTGACCAACGGCACCTCGACCTCGAATAAAATCGTCGGAATGTATGCTGCCCCGGCAGGCAGCACGATTCTG GTGGACCGCAACTGCCATAAGTCGCTCACGCATCTGTTGATGATGAGCGATTTGATCCCCATCTGGCTCAAGCCAACACG CAACGCATTGGGTATTTTGGGCGGTATTCCGCAAAAAGAGTTCACCCGTGCCAGCATCGAGCAAAAAGTGGCGGTCACGC CGCGCGCCAGTTGGCCGGTACATGCGGTGATTACCAATTCGACCTACGACGGTTTGCTCTACAACACTCAGTACATCAAG CAAACCCTTGAGGTGCCGTCGATCCACTTTGATTCTGCCTGGGTTCCCTATACCAACTTTCATCCCATCTATGAGGGGAA AAGCGGCATGAGCGGTGAGCGGGTGCCGGGTAAAGTCTTCTATGAAACGCAGTCCACCCATAAACTGCTGGCGGCTTTTT CCCAGGCTTCGCTGATTCATATTAAAGGCGACTATGACGAGCAGACGTTTAATGAAGCCTACATGATGCACACCACCACC TCACCGAACTATGCCATCGTCTCATCCATTGAGACAGCGGCGGCGATGCTGCGGGGAAATCCGGGCAAAAGGCTCATTAA CCGGTCAGTGGAACGCGCCCTGCATTTCCGTCGTGAGATACAGCGGTTGCGAGAAGAGTGCGACAGCTGGTTTTTTGATA TCTGGCAGCCTGAACACGTTGATGAAGCCCAGTGCTGGCCGATACAGCCGGGGGAAGAGGACTGGCACGGATTCACCCAG GCCGATCGCGACCACATGTATCTTGATCCGATCAAGGTAACGATCCTGACACCCGGCATGAGCGAGCTGGGCGTGATGGC GGAAGAGGGCATTCCGGCGGCGCTGGTGGCGAAGTTCCTGGATGAGCGCGGCATCGTGGTTGAAAAAACCGGCCCTTACA ATCTGTTATTCCTGTTTAGTATCGGCATTGATAAAACCAAAGCGATGAGCGTGCTGCGAGGGTTAACGGAATTTAAGCGC GCCTACGATCTCAATCTCCGGGTCAAAAATATGTTGCCGGATCTCTATGCGGAGGATCCCGATTTTTATCGCAACATGCG TATTCAGACGCTGGCGCAGGGGATCCACCGTCTTATCCAGCAACATGATTTACCGCAGCTCATGTTGAAGGCGTTTGACG TGTTGCCCGAGATGAAAATGACGCCGCATCAGGCTTTTCAGCAACAGGTGAAGGGCAATATTGAAACCGTGAACATCAAT GAGCTGGTGGGCCGCATCTCTGCCAACATGATCCTGCCTTATCCTCCGGGCGTTCCTCTGGTGATGCCTGGTGAAATGAT CACAGAACAAAGCCGCGCCGTACTCGACTTCCTGTTAATGCTGTGTAGCATTGGACGCCACTATCCTGGCTTTGAGACGG ATATTCACGGCGCGATCCTCACCGAAGAGGGGGAATATCGGGTACGTGTGCTGAAACAGGCCGGCTAA Protein sequence : MNILAIMGAHGVFYKDEPLRELEVALSQQGFQLIRPKNNDDLLKLIEHNPRISGVIFDWDEHNSPELCGEINQLNEYLPL YAFINTHSQMDISINEMRMPLHFFEYALNAADDIALHIRQYTDDYLDNITPPLTKALFTYVKEGKYTFCTPGHMAGTAFQ KSPVGCLFYDFFGANTLKSDISISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTIL VDRNCHKSLTHLLMMSDLIPIWLKPTRNALGILGGIPQKEFTRASIEQKVAVTPRASWPVHAVITNSTYDGLLYNTQYIK QTLEVPSIHFDSAWVPYTNFHPIYEGKSGMSGERVPGKVFYETQSTHKLLAAFSQASLIHIKGDYDEQTFNEAYMMHTTT SPNYAIVSSIETAAAMLRGNPGKRLINRSVERALHFRREIQRLREECDSWFFDIWQPEHVDEAQCWPIQPGEEDWHGFTQ ADRDHMYLDPIKVTILTPGMSELGVMAEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMSVLRGLTEFKR AYDLNLRVKNMLPDLYAEDPDFYRNMRIQTLAQGIHRLIQQHDLPQLMLKAFDVLPEMKMTPHQAFQQQVKGNIETVNIN ELVGRISANMILPYPPGVPLVMPGEMITEQSRAVLDFLLMLCSIGRHYPGFETDIHGAILTEEGEYRVRVLKQAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 72 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PAGR_g3389 | YP_005994101.1 | lysine decarboxylase LdcC | VFG1670 | Protein | 0.0 | 65 |
