Gene Information

Name : PAGR_g0283 (PAGR_g0283)
Accession : YP_005991043.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 319589 - 320053 bp
Length : 465 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGAGAACAAATACAATGAGAGCGTGATTATTTCTGTTACTGACTGGATTAATAAGAATCTGGACCAGCGCTTAAG
CATTGACGACATTGCTGAAAAGGCGGGTTATTCAAAATGGTATCTACAAAAGTTATTTTCCCGTTATCATAATGAAACGC
TGGCCCATTACATCCGTAGAAAGAAATTAATTGCCTGTATTAATGATTTAAAATACAGCCATGCGCCCATTATCAGCCTG
GCGGTTAAATACCACTTTGAAAGTCAGCAGTCTTTTACCCGCTCCTTCAAGCAGATGATGGGCTGTACGCCTAGCGTATG
CCGTAAAAGCCAGCGACTGAACGTTACCGACAGCAACGCCCATCCTTGCAGCGTATGTAGTAAGGCTGAAAACCCCCCAA
AAAAGAAGTTATTTAGCGGAATAAACGAAACCTTCGGGGTTGGTCATTTAGTCCGCTTGCTTTAA

Protein sequence : 
MNENKYNESVIISVTDWINKNLDQRLSIDDIAEKAGYSKWYLQKLFSRYHNETLAHYIRRKKLIACINDLKYSHAPIISL
AVKYHFESQQSFTRSFKQMMGCTPSVCRKSQRLNVTDSNAHPCSVCSKAENPPKKKLFSGINETFGVGHLVRLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 4e-22 45
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 4e-22 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g0283 YP_005991043.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 2e-22 45
PAGR_g0283 YP_005991043.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 8e-20 41
PAGR_g0283 YP_005991043.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 1e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g0283 YP_005991043.1 AraC family transcriptional regulator VFG1038 Protein 2e-22 45