Gene Information

Name : PAGR_g2495 (PAGR_g2495)
Accession : YP_005993222.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Unknown
Product : site-specific recombinase, phage integrase family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2706556 - 2707770 bp
Length : 1215 bp
Strand : -
Note : -

DNA sequence :
ATGCAGCTCAATGCCAGACAGGTAGAGACTGCCAAGCCCAAAGATAAACCCTACAAGTTAGCGGACGGTGGGGGCATGTA
TCTGGAGGTGTTCCCGAACGGCACTAAAAGCTGGCGCATGAAATACCGGATCGCAGGTAAAGAAAAATGTGTGGTGTTTG
GTGTCTACCCGACCATTACCTTAGCCGATGCCAGAAGTAAAAGAGATGATGCTAAAAAGCTGCTGGTTAATGGCGTTGAT
CCGAGTGCGTTTAAGCAAGAAAGCAAACAAGCCCACATCGAAGAAGTCAAAAACACCTTTCAGCAAATTGCGCTCGAATG
GCACAACATGAAAGTGAAGAAATGGTCGGCAGGGTATGCCTCTGACATTCTTGAAGCCTTCAACAAAGACGTCTTCCCGT
TCATTGGTCAACGTCCTGTTGCAGACATCAAGCCGTTGGAACTACTGAACGTGCTGAAAAAGATGGAAGACCGAGGAGCA
ACCGAAAAAGCCAAGAAAGTGCGTCAACGCTGCGGCGAAGTGTTTCGCTATGCCATCGTGACAGGCAGAGCCGAGTATAA
TCCCGCGCCTGATCTCACCAGTGCCATGCAGGGGCATGAATCTACACATTACCCGTTCCTGACCACTGAAGAGCTTCCTG
CTTTCTTTAAAGCCCTTGCTGGCTACTCTGGTAGTGAACTGATGGTGCTGGCAGCAAGATTGCTGATCATTACTGGCCTG
AGAACAGGTGAATTGCGCGGTGCGTTATGGTCAGAAATCGATACCAAGAAAGCGCTATGGGAAATTTCTGCTGAACGCAT
GAAAATGCGCCGCCCTCATATCATCCCGCTATCTACCCAAGCGTTAGCCATTATCGAACAGATCAGAGCAATGACGGGGC
AATTTCCTTTACTGTTTCCGGGACGCAATGACCCAAGTAAGACCATGAGCGAAGCCAGTATCAATCAGGTATTTAAGCGA
ATTGGCTATACAGGCCGGGTTACAGGTCACGGCTTCCGTCATACCATGAGCACCGTTCTTCATGAACAGGGCTATAACAC
CGCATGGATTGAAACCCAACTGGCGCATGTGGATAAGAATGCTATCCGTGGCACCTACAACCATGCGCAATACCTAGATG
GTAGACGTGAGATGCTGCAATGGTATGCTGACTACATGGCAAGCCTTGAGAAAGGCGGCAATGTGGTGCAGGGAGCGTTT
AATCGGCGTGAGTAA

Protein sequence :
MQLNARQVETAKPKDKPYKLADGGGMYLEVFPNGTKSWRMKYRIAGKEKCVVFGVYPTITLADARSKRDDAKKLLVNGVD
PSAFKQESKQAHIEEVKNTFQQIALEWHNMKVKKWSAGYASDILEAFNKDVFPFIGQRPVADIKPLELLNVLKKMEDRGA
TEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESTHYPFLTTEELPAFFKALAGYSGSELMVLAARLLIITGL
RTGELRGALWSEIDTKKALWEISAERMKMRRPHIIPLSTQALAIIEQIRAMTGQFPLLFPGRNDPSKTMSEASINQVFKR
IGYTGRVTGHGFRHTMSTVLHEQGYNTAWIETQLAHVDKNAIRGTYNHAQYLDGRREMLQWYADYMASLEKGGNVVQGAF
NRRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 2e-142 70
aec33 AAW51716.1 Int Not tested AGI-3 Protein 4e-125 63
int CAC39282.1 integrase Not tested LPA Protein 1e-125 63
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 1e-124 63
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 1e-124 63
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 1e-124 63
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-124 62
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-124 62
int ACU09430.1 integrase Not tested LEE Protein 2e-124 62
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-124 62
int AAD44730.1 Int Not tested SHI-2 Protein 1e-124 62
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 6e-120 59
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 2e-75 43
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 1e-72 41
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 1e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g2495 YP_005993222.1 site-specific recombinase, phage integrase family VFG0598 Protein 6e-125 63
PAGR_g2495 YP_005993222.1 site-specific recombinase, phage integrase family VFG0783 Protein 1e-124 62