Gene Information

Name : PAGR_g2494 (PAGR_g2494)
Accession : YP_005993221.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : AlpA family phage transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2706029 - 2706229 bp
Length : 201 bp
Strand : -
Note : -

DNA sequence :
ATGACAACAAGAAGACTTATTCGCCTGCCGGAAGTGATGAATAAAACAGGATATAGTAAAGCATGGATTTATCGACTTAT
TAGCAAGGGCGTATTCCCCGAACCGATAAAGATCGGAATAAGAGCCAGAGCTTTTGTTGAAAGTGAAATCGATGAATGGA
TTGAAAATATTATTCAGTTTTCACGTAAACATGCTGATTAA

Protein sequence :
MTTRRLIRLPEVMNKTGYSKAWIYRLISKGVFPEPIKIGIRARAFVESEIDEWIENIIQFSRKHAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 50
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 50
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-07 50
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 7e-06 49
unnamed CAA21398.1 - Not tested HPI Protein 1e-05 49
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 7e-05 47
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 6e-07 47
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 8e-07 44
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 8e-07 44
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 2e-06 44
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 1e-07 42
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 4e-05 41
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g2494 YP_005993221.1 AlpA family phage transcriptional regulator VFG1118 Protein 7e-08 50
PAGR_g2494 YP_005993221.1 AlpA family phage transcriptional regulator VFG1141 Protein 2e-07 44
PAGR_g2494 YP_005993221.1 AlpA family phage transcriptional regulator VFG1480 Protein 2e-05 41