Gene Information

Name : PAGR_g2078 (PAGR_g2078)
Accession : YP_005992810.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : Psp operon transcriptional activator PspF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2252399 - 2253412 bp
Length : 1014 bp
Strand : -
Note : -

DNA sequence :
ATGTCTCCTAACAACGATAACCTGCTGGGCGAATCGAACAACTTTCTGGAAGTGCTGGAGCAGGTATCGAAACTCGCACC
GTTGGAAAAACCGGTTTTGGTCGTGGGCGAACGCGGTACCGGTAAAGAGCTGATCGCCAGTCGTCTGCACTATCTGTCCG
ATCGCTGGCAGGGCCCTTTTATCTCGCTCAACTGTGCCGCGCTAAATGAAAACCTGCTGGATTCGGAGCTGTTTGGACAT
GAGGCAGGCGCCTTTACCGGCGCGCAAAAGCGTCACCTGGGCCGTTTTGAACGGGCAGACGGCGGCACGCTGTTCCTTGA
TGAGCTGGCAACCGCCCCGATGCTGGTTCAGGAAAAACTCCTGCGGGTTATTGAATACGGTCAGCTTGAACGCGTAGGCG
GGAATCACGTTTTTCAGGTGAATGTGCGCCTGATTTGCGCCACCAATGAAGACCTGCCCGCGCTGGCCGCCGCCGGGAAG
TTTCGTGCCGATCTGCTCGATCGTCTGGCGTTCGATGTGGTTCAACTGCCGCCGCTCCGCGAGCGCCGTAGCGATATTCT
GGTGATGGCGGACCATTTCGCCATCCAGATGTGCCGGGAGTTGACCTTGCCCCTGTTTCCCGGCTTTACTCAGCAGGCTC
AGCAAACCTTACTGGAACACCCGTGGCCGGGTAACGTGCGTGAGCTAAAAAACGTCGTTGAGCGGTCGGTCTATCGCCAT
AACACCAGCGATGAACCTCTGGATAACATCATTATCAACCCGTTTGAACGACGCACCGCCCCCGAAGATGCCCCGCCGCC
TGCCCACGTGCCGGACGCGGCATCGGCCCTGCCTTCTTTACCGCTTGACCTGCGTCAGTGGCAGAATCAGCAGGAGCACG
ATGTGGTAGAAATCAGCTTACAACAGGCGAAGTACAATCAACGTCGTGCCGCCAGCTTACTGGGTGTGACCTACCACCAG
CTCAGAGCGATGATGAAAAAGCACGGGATTCAGGCGCGAGATGGACAAGCATAA

Protein sequence :
MSPNNDNLLGESNNFLEVLEQVSKLAPLEKPVLVVGERGTGKELIASRLHYLSDRWQGPFISLNCAALNENLLDSELFGH
EAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGQLERVGGNHVFQVNVRLICATNEDLPALAAAGK
FRADLLDRLAFDVVQLPPLRERRSDILVMADHFAIQMCRELTLPLFPGFTQQAQQTLLEHPWPGNVRELKNVVERSVYRH
NTSDEPLDNIIINPFERRTAPEDAPPPAHVPDAASALPSLPLDLRQWQNQQEHDVVEISLQQAKYNQRRAASLLGVTYHQ
LRAMMKKHGIQARDGQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpRS ABA47311.1 HrpRS Virulence S-PAI Protein 3e-35 42