Gene Information

Name : PAGR_g1859 (PAGR_g1859)
Accession : YP_005992594.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator PmrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2020057 - 2020743 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATATTGATTGTTGAAGACGATGCCCTGCTACTTCAGGGGCTGGTACTGGCACTGGAAGGTGCAGGCTACGTGTG
CGATGGTGTTTCAACGGTCCGTTCTGCCGAAGCCCACCTTGCCAGCGGACTTTACAGCCTGGTGCTGCTGGATATCGGCC
TGCCGGACGAAGACGGCCTGCATTTACTGCAACGCCTGCGTCGTCAAAAGCAGATGCAGCCCGTTTTAATCCTGACCGCA
CGCGATACCATTGAAGAGCGCATAGCCGGACTCGATGCCGGCGCTGATGACTATTTGATTAAGCCTTTTGCGCTGGATGA
GTTGCTGGCACGGATTCGCGCGCTGATCAGGCGTCACGTCAACCAGGGCGATTCCCGCCTCGAAGTGGGTAATCTGTCAC
TGGATATGACCCACCGCCAGATTCATCTGGATGACGTGCTGCTCGACCTGACGCCCAAAGAGTTTTCCATTCTATCCCGG
TTGATGTTGAAAGCAGGCCATCCGGTTCACCGTGAGTTGCTGTATCAGGACATCTACAACTTTGATAATGAGCCCTCCAC
CAATACGCTGGAAGTCCATATTCATAACCTGCGCGACAAGGTGGGCAAAGCCACGATCCGAACGGTTCGCGGTTTTGGCT
ATGCCTTATCTCAGCCGCGCGCAGAAAACGAGTCATCACCCGAATGA

Protein sequence : 
MKILIVEDDALLLQGLVLALEGAGYVCDGVSTVRSAEAHLASGLYSLVLLDIGLPDEDGLHLLQRLRRQKQMQPVLILTA
RDTIEERIAGLDAGADDYLIKPFALDELLARIRALIRRHVNQGDSRLEVGNLSLDMTHRQIHLDDVLLDLTPKEFSILSR
LMLKAGHPVHRELLYQDIYNFDNEPSTNTLEVHIHNLRDKVGKATIRTVRGFGYALSQPRAENESSPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-23 42
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-23 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g1859 YP_005992594.1 two component transcriptional regulator PmrA BAC0487 Protein 6e-51 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g1859 YP_005992594.1 two component transcriptional regulator PmrA VFG0473 Protein 1e-57 73
PAGR_g1859 YP_005992594.1 two component transcriptional regulator PmrA VFG0596 Protein 5e-24 42