|
Name : PAGR_g1736 (PAGR_g1736) Accession : YP_005992475.1 Strain : Pantoea ananatis PA13 Genome accession: NC_017554 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : - COG ID : - EC number : - Position : 1902194 - 1902928 bp Length : 735 bp Strand : - Note : - DNA sequence : ATGATGCGTCGACTGCTCCCTCTTCTGCCGCTGCTGTTGCTGGCACCGGTTGCCCATGCCCAGTTGCCGGGCCTGGTTAG TCAGCCATTAGCTAACGGTGGCCAAAGCTGGTCACTGCCGGTACAAACGCTGGTCTTTATTACTTCGTTAACATTCCTGC CAGCCATTCTGTTAATGATGACCAGCTTTACCCGCATCATTATTGTTTTCGGCCTGCTACGTAATGCGCTGGGCACGCCT TCCGCGCCGCCTAACCAGGTATTACTTGGCCTGACCTTATTTTTAACGTTTTTTATTATGGCACCGACCTTCGATAAAAT TTATCAGGATGCCTACCTGCCATTTAGCCAGGATAAAATCAGCATGGATGTGGCGATCGATAAAGGCGCACAGCCGCTGC GGGAGTTTATGCTGCGGCAAACCCGTGAGGCTGACTTAGCGTTATTTGCCCGCCTGGCAAATACAGCGCCGATTGCGGGT CCGGAAGCCGTACCTATGCGTATTCTGTTGCCGGCTTACGTGACCAGTGAATTAAAAACCGCATTCCAGATTGGCTTTAC CGTATTTATTCCTTTTTTAATTATCGACCTGGTGGTTGCCAGCGTGTTAATGGCACTCGGGATGATGATGGTTCCCCCGG CAACAATTGCGCTGCCGTTCAAATTAATGTTGTTTGTTCTGGTGGACGGCTGGCAATTGCTGGTTGGCTCGCTGGCGCAA AGTTTCTATTCCTGA Protein sequence : MMRRLLPLLPLLLLAPVAHAQLPGLVSQPLANGGQSWSLPVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTP SAPPNQVLLGLTLFLTFFIMAPTFDKIYQDAYLPFSQDKISMDVAIDKGAQPLREFMLRQTREADLALFARLANTAPIAG PEAVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLAQ SFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 5e-23 | 43 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 5e-23 | 43 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 5e-23 | 43 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 1e-24 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 3e-26 | 42 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 6e-28 | 41 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 6e-27 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 3e-27 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 2e-26 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-27 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 3e-27 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-27 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 3e-27 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-27 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 3e-27 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-27 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 3e-27 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 3e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PAGR_g1736 | YP_005992475.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 1e-88 | 89 |
| PAGR_g1736 | YP_005992475.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 5e-68 | 67 |
| PAGR_g1736 | YP_005992475.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 1e-57 | 61 |
| PAGR_g1736 | YP_005992475.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 2e-54 | 55 |
| PAGR_g1736 | YP_005992475.1 | flagellar biosynthetic protein FliP | VFG0188 | Protein | 2e-28 | 41 |
| PAGR_g1736 | YP_005992475.1 | flagellar biosynthetic protein FliP | VFG0827 | Protein | 2e-27 | 41 |
