Gene Information

Name : PAGR_g1674 (PAGR_g1674)
Accession : YP_005992417.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : type VI secretion system protein VasG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1840353 - 1842962 bp
Length : 2610 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGAGATCAGCCGTGCCGTGCTATTCGGCAAACTGGATACGCTGTTATTTACCTCGCTTGAGAGTGCGACCGCCTT
TTGTAAACTGCGTGGCAACCCCTATGTTGAACTGGTGCACTGGTTGCATCAGCTCATGCAGCAGCAGGATGGCGATCTTC
AGCAGGTGATTAAGCATTTTTCACTGGATGAAAACGCGCTGACGCGGGATATCGTCGCTGCACTGGACCGCCTGCCGCGC
GGTGCGGGTGCGGTGTCCGATCTCGCAGAACACATCGACAGCGCCGTTGAGCGCGCCTGGGTTTATGCATCACTCAAATA
CGGTGCTACCCGTATTCGCGGTGGTCACCTGCTGATAGGTATGCTGAAGACCTTTACGCTCGCCAGCGTCCTGAAAGGCA
TTTCACCCCAGTTTTCACGCGTGAACGCCGATGCTTTACTGGAGCAGTTCGATACCTTGCTGGCGAACAGTAAAGAAGTT
CAGCAGGCGCTGGTTCAGCCCGCAGGCGATGCTGCCGCCCCTCCGGCGGCGGGCGACAGCACGTTAGCGCAGTATGCGCA
GGATCTGACCGCGCGAGCGCGCGACGGAAAAATCGACCCGGTTGCGGGCCGTGATGAAGAGATCCGCCAGATGGTGGATA
TCCTGATGCGCCGTCGCCAGAACAACCCGTTACTCACCGGTGAAGCTGGCGTGGGTAAAACGGCGGTGGTAGAAGGGCTG
GCGCTGCGCATTGCCGCCGGTGATGTACCGGCACCGCTTCGTGACGTGCAACTGTGGCTGCTGGATATTGGCATGTTGCA
GGCAGGCGCCGGCATGAAAGGCGAATTCGAAGCGCGTTTACAGGCCCTGATTAACGAAGTGCAATCCAGCCCTACGCCGA
TTGTGTTATTCATTGATGAAATTCATACCCTGGTCGGTGCAGGCGGTCAGCAGGGCACAGGCGATGCCGCCAACCTGTTA
AAGCCGGCCCTGGCGCGCGGACAGTTGCGCACGATTGGCGCAACGACCTGGGCGGAATACAAGAAATACATCGAAAAAGA
TCCTGCATTGACCCGCCGCTTCCAGACCGTTCAGGTGCAGGAGCCGGATGAAGCAAAAGCGATTCTGATGCTGCGCAGCA
CCGTGAGCGCGCTGGAAAAACACCATCAGGTGCTGTTACTGGATGAAGCCGTCAGCGCCGCCGTTAAGCTCTCTCACCGT
TACATTCCTGCCCGCCAGCTGCCGGATAAAGCCGTAGCCTTACTGGATACCGCCTGTGCACGCGTTGCCGTCAGCCAGGG
CGCACAGCCTGCCGCGCTGGAAGACTGCCTGCACCGTCTGGCCGCGCTGGAAATCGAAGCGGAGATCGCCGAACGTGAAG
TCAAAGTGGGGCTGGGTGATGAAACCCGCCAGGCCACGATTGCCGCCCAGCGCGCTGCCCTGGAAGCAGAGCGCGATGCG
CTGGACGCCCGCTGGCAGCAGGAGCGTGAGCTGGTCGAACAGCTGATTGCCCTGCGCGCGCGTTGCGTGACCGAAGGCGA
AACTTCCCTGCGCGAGCAGCTCGATGAAACCCGACAGAAGTTGCATGCGGTTCAGGGTGAAGCCCCGTTACTGTTTGCTG
CCGTTGACGCCAGCGTCGTTGCCGCAGTGGTATCCGACTGGACCGGCATTCCGCTGGGCCGGATGGTGAAAAACGAAATT
GACGCCGTGCTTAACCTCGCGGACACGTTGAATCAGCGCGTAATTGGGCAGCGTCATGGGCTGGATCTGATTGCCAAACG
CGTTCGCACCTCACGCGCCCGACTGGACAATCCCAATAAACCGGTCGGTGTGTTTATGCTCTGTGGCCCGTCAGGCGTCG
GGAAAACCGAAACCGCGCTGGCGCTGGCCGAATCGCTTTATGGTGGAGAGCAAAACATCATCACCATCAACATGAGCGAG
TTCCAGGAAGCGCACACCGTTTCAACGCTGAAAGGTGCCCCTCCAGGCTATGTAGGTTACGGTGAAGGCGGTGTGCTGAC
GGAGGCCGTGCGTCGTCGTCCTTACAGCGTCGTGCTGCTGGATGAGATTGAAAAAGCGCATCCTGATGTGCATGAGCTGT
TTTTCCAGGTATTCGACAAAGGCTGGATGGAAGATGGAGAAGGGCGCCACATTGATTTCCGCAATACCATTATCATCCTC
ACCTCTAACGTCGGTACGCAACTGATCAGTGCGCTCTGTGCCGATCCGGAACTCATGCCGGATCCCGACGCGCTCAGCAC
CGCTTTACGTAAACCCTTACTGGAGGTGTTCCCGCCTGCACTGCTGGGCCGTCTGCTGGTGGTGCCTTACTATCCCCTCA
GTGACGAGATGCTGGCAGAGATTGTTAAGCTGCAACTGGGGCGCATTGTACGCCGCCTGGAAGAGAACCACGGTATTGAA
GCCATTATTGACGATTCGGTCGTCAGCCAGATCGTGCAGCGTTGTACGGAAGTGGAGTCTGGAGGTCGCATGGTCGATGC
CATCCTGACAAATACCCTGTTGCCGCAGATGAGCCAGATACTGCTCAGCGGCCATGCTCGTGATGAACGTTATCGTCGCG
TGCAGGTCAGCTGTGATCAGGGCGAGTTTGTTTGCCAGTTTGCTGTCTAA

Protein sequence :
MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVIKHFSLDENALTRDIVAALDRLPR
GAGAVSDLAEHIDSAVERAWVYASLKYGATRIRGGHLLIGMLKTFTLASVLKGISPQFSRVNADALLEQFDTLLANSKEV
QQALVQPAGDAAAPPAAGDSTLAQYAQDLTARARDGKIDPVAGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGL
ALRIAAGDVPAPLRDVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSPTPIVLFIDEIHTLVGAGGQQGTGDAANLL
KPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVQEPDEAKAILMLRSTVSALEKHHQVLLLDEAVSAAVKLSHR
YIPARQLPDKAVALLDTACARVAVSQGAQPAALEDCLHRLAALEIEAEIAEREVKVGLGDETRQATIAAQRAALEAERDA
LDARWQQERELVEQLIALRARCVTEGETSLREQLDETRQKLHAVQGEAPLLFAAVDASVVAAVVSDWTGIPLGRMVKNEI
DAVLNLADTLNQRVIGQRHGLDLIAKRVRTSRARLDNPNKPVGVFMLCGPSGVGKTETALALAESLYGGEQNIITINMSE
FQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRNTIIIL
TSNVGTQLISALCADPELMPDPDALSTALRKPLLEVFPPALLGRLLVVPYYPLSDEMLAEIVKLQLGRIVRRLEENHGIE
AIIDDSVVSQIVQRCTEVESGGRMVDAILTNTLLPQMSQILLSGHARDERYRRVQVSCDQGEFVCQFAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g1674 YP_005992417.1 type VI secretion system protein VasG VFG2076 Protein 0.0 60
PAGR_g1674 YP_005992417.1 type VI secretion system protein VasG VFG2084 Protein 8e-136 43