Gene Information

Name : PAGR_g1672 (PAGR_g1672)
Accession : YP_005992415.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : type VI secretion system protein ImpG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1837376 - 1839253 bp
Length : 1878 bp
Strand : +
Note : -

DNA sequence :
ATGGACAGCAAGCTGCTTGATTACTACAACCGTGAACTGGCCTATCTGCGCGAGATGGGCGCGGAGTTTGCTGCCCAGTA
TCCCAAGGTCGCCGGGCGGCTTGGTATGCGCGGCATTGACGTCGCCGATCCTTATGTCGAAAGACTTATGGAGGGTTTCG
CGTTTCTGACGTCACGCGTGCAGTTAAAGATGGATGCCGAGTTTCCACGCTTTTCTCAGCGGATGCTGGAAATGGTGGCA
CCGGGCTACCTTTCACCTACGCCGTCGATGGCCATCGCCCAGCTCACGCCGGACAGCCGCAAAGGCGATATCAGCAACGG
TTTCTTAGTGCCGCGCGGCACAATGATGGAAAGCCAGAACCTGAAAAAAACGGGCGTCACCTGCAGCTATACCACCGCGC
ACGATGTGATGTTACAGCCCCTGCGTATCAGCGATGTGTCGTTAGGTGGCGTGCCAGCGGATATCCCGTTAGGCGAGTTG
AAAGCGGGCGGCTCGACGGCGGCGTCCAGCGCCCTCCGTATCCGCATCACCTGCGAAGGCATTTCATCGTTAAGCCAGCT
CAGTCTCGATGACGTGATGTTTTTCCTGAGCGGACCCGATATCCAGGCCCTGAAACTGATGGAGCTGCTGATGCAGCATC
GTGTCGGAATCATCCTGCAGTCCGTGGAAGCAAAACCGCAACGTCAGGTTCTGCCGGATGACGCGCTTCAACAGGAAGGC
TTTTCGACCGAGCAGGCCCTGTTGCCCGACGATCTGCGTAATTTTGACGGCTACCGCCTGCTGCAGGAGTATTTTGCATT
CCCGGCACGCTTCCAGTTTATCAGCCTGCGTCAGCTGGCGCCTTTCCTGCAGCGCTGCGATAACGCCCTGTCGTTTGACA
TCGTCATCCTGCTGGATAAGGCCGATGCGGCGCTGGAAAGCGTTGTCGACAGCGCCCATCTGGCCCTGCACTGCACGCCG
GTCATTAACCTGTTCCCGAAAACCGCCGAGCGGCTTAAGGTCAGCGACAGTCAGCACGAGTATCACTTGGTGGTCGATAA
CATCCGTCCGCTGGACTATGAGATCCATTCGGTGAAGCGCTTGTTTGCCTCTGTCGAAGGGCAGCGCGAAGAGCAGATCT
TCCGGCCGTTCTGGAGCACCTTCAGCCATGACGGCGGGGATTATGGCGCGTATTTCTCCCTGCGTCGTGAACAGCGCACG
CTCTCTGAGCACGCGTTGCGCTATGGCACCCGAACAGGCTATATCGGTTCTGAAGTGTTTCTCTCCCTGGTGGATCAAAA
TCATACACCGTGGAACAGCGATATCCGCTATTTGTCTGCGGAAGTGATGTGTACCAGCCGTGACCTGCCTTTGATGCTGC
TACAGCAAGAGCAGGCCAACTTTGTAATGCCGGATTCCATTCCTGTCGGGCAACTTAAATTGTGCAAAGGCCCGACGCCA
CCGCGTCCGGCGCTGGCTGAAGGGCTTTCAGCATGGCGACTCATCAGTCATCTGCAGATGAACTATCTAAGCCTGATGGA
CAGCAGCGATGGCGAAGGGGCTGCGGCACTGCGCCAGATGCTGAGCCTGTATGCCAGCCTGGCCGAAACGCCGCTAACGC
GTCAGATTGACGGAATTCGGCACTGCAACCTCAAAGCCGTTCACCGCCGGGTGCCCGAGCCGGGCCCCGTGGTGTTTGCG
CGCGGGGTCAGCATTGCGCTTGAGGTGGATGAGCAGGCGTTTTCAGGTGCCAGCCCCTGGCTGTTCGGCAGCGTGCTGGA
GCGGGTCTTTTCTCGCCTCGTGGCGCTTAACAGCTTTACCGAATTCACCCTGAGCAGCCAGCAGCGCGGCGAAGTGGGCT
ACTGGCCGCCGCGCATGGGCAAAAAGGCGCTGCTATGA

Protein sequence :
MDSKLLDYYNRELAYLREMGAEFAAQYPKVAGRLGMRGIDVADPYVERLMEGFAFLTSRVQLKMDAEFPRFSQRMLEMVA
PGYLSPTPSMAIAQLTPDSRKGDISNGFLVPRGTMMESQNLKKTGVTCSYTTAHDVMLQPLRISDVSLGGVPADIPLGEL
KAGGSTAASSALRIRITCEGISSLSQLSLDDVMFFLSGPDIQALKLMELLMQHRVGIILQSVEAKPQRQVLPDDALQQEG
FSTEQALLPDDLRNFDGYRLLQEYFAFPARFQFISLRQLAPFLQRCDNALSFDIVILLDKADAALESVVDSAHLALHCTP
VINLFPKTAERLKVSDSQHEYHLVVDNIRPLDYEIHSVKRLFASVEGQREEQIFRPFWSTFSHDGGDYGAYFSLRREQRT
LSEHALRYGTRTGYIGSEVFLSLVDQNHTPWNSDIRYLSAEVMCTSRDLPLMLLQQEQANFVMPDSIPVGQLKLCKGPTP
PRPALAEGLSAWRLISHLQMNYLSLMDSSDGEGAAALRQMLSLYASLAETPLTRQIDGIRHCNLKAVHRRVPEPGPVVFA
RGVSIALEVDEQAFSGASPWLFGSVLERVFSRLVALNSFTEFTLSSQQRGEVGYWPPRMGKKALL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 2e-122 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g1672 YP_005992415.1 type VI secretion system protein ImpG VFG2074 Protein 1e-132 45