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Name : PAGR_g1301 (PAGR_g1301) Accession : YP_005992047.1 Strain : Pantoea ananatis PA13 Genome accession: NC_017554 Putative virulence/resistance : Virulence Product : fimbrial usher protein PapC Function : - COG functional category : - COG ID : - EC number : - Position : 1400615 - 1403032 bp Length : 2418 bp Strand : + Note : - DNA sequence : ATGTCGGGTTATTGCGGCGATACACGCGCTGTTGAATTTAATACTGACATTCTTGATGCCGAAGATCGAAATAATATTGA TTTATCCCGTTTCGCCCGTGCGGGTTACATCATGCCGGGTACCTATAGTCTCACACTTCGGTTGAATGAGCGGAATATCA TTGAACAGGAGGTGGTGTTTAAAGAGAAGAAAGGTGCCGAAGAAGTGCAGGCCTGTCTGACGCCTCAGCAGGTTGAGTTA CTCGGTCTTAAGCACGATGCGCTGGCAAAGATAAGCTTTGACCATAATGACGACTGCGCTGATTTTTCCGCGCTGGACGG TGTCAGGCTGCGCGGCGATCTTTCAACCTCGTCGCTCTATATTTCGGTACCCCAGGCCTGGCTCGAATATCAGGATGCCA CCTGGCTGCCGCCTTCACGCTGGGAGAATGGCGTACCGGGGGTAATGCTGGATTATAACATCAATACCAGCTTCACCCGT CCGGTACACGGCAGTCAGTCACAGCGAGCCAGTGCCACCGGTACGCTCGGTGCAAACAGCGGCCCCTGGCGTTTGCGAGG CGACTGGCAGGCTAACTACAACAAGACCGGCGGCTCCAGCGGTGGCACGACCCAACGTATCGACTGGAGTCGCTTTTACC TTTATCGCGCGCTGCCGTCGCTTATGGCAAAACTCACCCTGGGTGAGGATTATCTTCGATCGGATATTTTTGATACATGG CGCTTCACCGGCGCGTCATTGGTCAGCGATGAAAGCCAGCTGCCCCCCAGGCTGCGCGGCTACGCGCCGGAGGTGAGCGG CATTGCACGCACCAATGCCAAAGTCATCATCAGCCAGCAGGGACGGATCATTTACGAAACCATGGTGGCGGCAGGACCGT TCCGCGTGCAGGAACTCAGCAGTGCGGTGAGTGGGCAACTGGACGTAAAGGTGGAAGAGCAGGACGGTAGCGTACAACAC TTTCAGGTCACCACCGCCACCGTGCCCTATCTGACCCGGCCGGGCCAGGTGCGTTACAAGCTGGCCACCGGGCGACCCTC CGATTTCCACCACCATGTGCAAGGGCCGACATTTGGCACCGCCGAAATATCATGGGGCGTGGCTAACAGTTGGTCACTGT ATGGCGGGAGTATTTTCTCTGCGGACTATCACAGTCTGGCCATTGGTGTGGCTCGTGATCTTTACCGGTTTGGTGCGCTC TCAGCTGATATCACCCAGTCTGCAACATCGTTACCGGACAGGGGACATTTACAGGGCCGTTCCTACCGTTTGAGTTATTC AAAGCGCTTTGACGACTTCAACAGCGATTTGACCTTTGCGGGCTACCGTTTTTCCGAACGCAATTACATGACCATGACGG AGTACCTTGACGCGCGCTATCGCAATGGCGTAACGGGCAGCAGTAAAGAACTTTATACCGTTACGGCGAGCAAAAGTTTT ACGGATCTCAACCTTTCTGCCTACCTGAGCTGGTCTCACCAGACGTACTGGGATCGCCCGCGTGCCGACCGTTACAGCCT TTCTGCCAGTCGTTATTTCGATCTGAACCGTTGGCGCAATCTGTCCGCCACCGTTTCCGCCGTGCGAACGCGCGATTACG GCCGTAAGGATGATGCGCTCTGGCTAACGATAAGTGTTCCTTTTGGTCAGGGGACGGCCAGCTACAACGGCAACTGGAGT CAACAGACTTACAGCCAAACCGCAGGATGGTATGAACGCCTGGAAAACGGTGACAGTTATCGCCTGTCGGCCGGAACGCG AAGCGGAAAAAGCGAGAGCATCACGACCCAGGCGAGCGGGCTGTACAGCCACACAGGAACGGCTGCAGACATCACCGCCA ATCTGGGCTGGCAGCAGAACGGCTATACCTCAGCGGGCTTGTCGATTAGCGGCGGCCTGACAGCGACCAGCGAAGGGGGC GCGCTCCATGGCAGCAGCGTCAGAGGAGGCACCCGAGTGTTGGTCAGCACCGATGGCGTGGCGAATGTGCCGGTGGGCCG TAATGGCATGACCAACCGATTTGGCCTGGCCGTAGAACCCTCCGTACCCGGCTACTATCGCGCCACGGTCAAGGTAGATG TGAATCGGTTGCCGGATGACATCGAAATCAGTAGCGCGCCCGTTGCGGAAGTTTCACTGACCGAAGGGGCGATTGGTTTC CGCCGTTTTGACGTGCTCAAGGGTGCGAAAGTCGTGGCGACTGTCGCGATGGCTGACGGCACTTTTCCTCCTTTCGGGGC CAGCGTGCGCAATGCAAAAGATCAGGAGTTAGGCATGGTGAGTGAAGGGGGCTTAGCCTGGATTTCAGGGGTTAAACCCG ACGAGGTGCTGACGCTGTTCTGGGGCGACAAGGCACAGTGCCGGGCAACGCTTCCGTCACTCATCCCCGACAGTCAACTG CTGCTGCCCTGCGAGTAA Protein sequence : MSGYCGDTRAVEFNTDILDAEDRNNIDLSRFARAGYIMPGTYSLTLRLNERNIIEQEVVFKEKKGAEEVQACLTPQQVEL LGLKHDALAKISFDHNDDCADFSALDGVRLRGDLSTSSLYISVPQAWLEYQDATWLPPSRWENGVPGVMLDYNINTSFTR PVHGSQSQRASATGTLGANSGPWRLRGDWQANYNKTGGSSGGTTQRIDWSRFYLYRALPSLMAKLTLGEDYLRSDIFDTW RFTGASLVSDESQLPPRLRGYAPEVSGIARTNAKVIISQQGRIIYETMVAAGPFRVQELSSAVSGQLDVKVEEQDGSVQH FQVTTATVPYLTRPGQVRYKLATGRPSDFHHHVQGPTFGTAEISWGVANSWSLYGGSIFSADYHSLAIGVARDLYRFGAL SADITQSATSLPDRGHLQGRSYRLSYSKRFDDFNSDLTFAGYRFSERNYMTMTEYLDARYRNGVTGSSKELYTVTASKSF TDLNLSAYLSWSHQTYWDRPRADRYSLSASRYFDLNRWRNLSATVSAVRTRDYGRKDDALWLTISVPFGQGTASYNGNWS QQTYSQTAGWYERLENGDSYRLSAGTRSGKSESITTQASGLYSHTGTAADITANLGWQQNGYTSAGLSISGGLTATSEGG ALHGSSVRGGTRVLVSTDGVANVPVGRNGMTNRFGLAVEPSVPGYYRATVKVDVNRLPDDIEISSAPVAEVSLTEGAIGF RRFDVLKGAKVVATVAMADGTFPPFGASVRNAKDQELGMVSEGGLAWISGVKPDEVLTLFWGDKAQCRATLPSLIPDSQL LLPCE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 54 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 0.0 | 51 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 51 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 0.0 | 51 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 0.0 | 51 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 0.0 | 51 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PAGR_g1301 | YP_005992047.1 | fimbrial usher protein PapC | VFG1548 | Protein | 0.0 | 51 |
| PAGR_g1301 | YP_005992047.1 | fimbrial usher protein PapC | VFG0884 | Protein | 0.0 | 51 |
| PAGR_g1301 | YP_005992047.1 | fimbrial usher protein PapC | VFG0895 | Protein | 0.0 | 51 |
