Gene Information

Name : PAGR_g1112 (PAGR_g1112)
Accession : YP_005991859.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1191767 - 1193029 bp
Length : 1263 bp
Strand : -
Note : -

DNA sequence : 
ATGGACGGAAACCATTCAGGGCGCGGATCACACGCCACCTTACCAATAACGAAATCCTCAAAGCCAAAACTCAAGAGAAA
GACTTCACGCTGCATGATGGGGATGGACCTTTACCTGCTCGTCAAAACATCCGATAAGAAGCTGTGGCGTTTTCGCTATC
AACGTCCTACAAGTAGTAGCCGTACAAATCTCAGCTTAGGCTCTTACGCTGCCCTAACGCTCGCTGTGGCACGCCAAATG
CGTGACAAATATCTGTCGCTGCTTGCGCAAGGGATCGACCCGCAGAAGCAGCAAGAGGAAGTATCGGAACAACGCCAAAT
CGAGCTGGATAGTATTTTTTTGGTTGTTGCCGGAAGGTGGTTTCAACTTAAGAGAAAAAGCGTTACCGTGAATTATGCGA
AGGATATTTGGCGATCGTTGGAGAAAGACATCTTCCTTTCTATTGGTGAGATTCCTGTTCAAACGCTTAAGGCTAGAACG
ATTGTTAAAGCATTGGAGCCGATTAAACCTCGCGGCGCGCTTGAGACAATCCCCCGTTTGGTTCAGCGCATTAACGAGAT
CATGATTTATGCGGTTAACACCGGTTTGATTGATGCAAATCCTGCTTCTGGCGTTGGGATGGCTTTTGAGAAACCCAAAA
AGCAAAATATGCCAACATTTCGACCTGAAGAATTGCCAAAGCTAATGCGTTCTCTAATTATGTCGAATCTTTCTGTTTCG
ACTCGCTGCTTGATTGAATGGCAACTCTTGACACTTGTTCGCCCTTCTGAGGCTTCCGGTACTCGGTGGCAAGAAATCGA
TCTAGATACTAAGCTCTGGACTATTCCAGCAGTGCGTATGAAGGCTAAGCGGGAGCACATTGTTCCTTTATCACCTCAGG
CTTTAGATATTTTGGAAGTAATGAAGGCTATTAGCGCTCACCGAGAGTATGTTTTTCCAAGCAGAAATGATCCACAGCAA
CCAATGAATAGCCAGACGGCTAATGCTGCTTTAAAACGCATTGGATATGGTGGTAAGTTAGTTGCACATGGCTTGCGTTC
AATTGCGAGTACAGCAATGAATGAAGCTGGATTTAAGGCCGATGTAATTGAAGCAGCTCTGGCGCATTCAGATAAAAATG
AAGTGCGTAGCGCCTATAACCGTTCCACTTATCTTGTACTCCGTCAGGAGTTAGTGACTTGGTGGTCAAATTTAGTTTAT
AATCAATTTATTATCAACCCGTTAGAGGTAAATGATGGCAACCCTAATATTAGATCAGAATGA

Protein sequence : 
MDGNHSGRGSHATLPITKSSKPKLKRKTSRCMMGMDLYLLVKTSDKKLWRFRYQRPTSSSRTNLSLGSYAALTLAVARQM
RDKYLSLLAQGIDPQKQQEEVSEQRQIELDSIFLVVAGRWFQLKRKSVTVNYAKDIWRSLEKDIFLSIGEIPVQTLKART
IVKALEPIKPRGALETIPRLVQRINEIMIYAVNTGLIDANPASGVGMAFEKPKKQNMPTFRPEELPKLMRSLIMSNLSVS
TRCLIEWQLLTLVRPSEASGTRWQEIDLDTKLWTIPAVRMKAKREHIVPLSPQALDILEVMKAISAHREYVFPSRNDPQQ
PMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFKADVIEAALAHSDKNEVRSAYNRSTYLVLRQELVTWWSNLVY
NQFIINPLEVNDGNPNIRSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20773.1 integrase Not tested VPI Protein 6e-93 51
int AAK20803.1 integrase Not tested VPI Protein 6e-93 51
unnamed AAA82714.1 integrase Not tested VPI Protein 6e-93 51
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 9e-93 51
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 9e-93 51
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 4e-91 49
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-82 47
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-82 47
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-82 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g1112 YP_005991859.1 integrase family protein VFG1092 Protein 1e-82 47