Gene Information

Name : PAGR_g1025 (PAGR_g1025)
Accession : YP_005991776.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : Chaperone protein clpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1085197 - 1087770 bp
Length : 2574 bp
Strand : +
Note : -

DNA sequence :
ATGCGTCTGGATCGTCTTACTAATAAATTTCAACTCGCTCTGTCCGACGCGCAGTCTTTGGCTTTAGGACAGGATAACCA
GTTTATTGAACCCTTGCACCTGATGAGCGCGTTGCTCAAGCAGGAAGGGAGTTCCGTTGCGCCCCTGTTGTCCTCAGCCG
GTACTGACGTAGCATCGTTACGTACGCAAATTGATCAGGCTATTGACCGTTTGCCGCAGGTAGAAGGCAGCGGCGGAGAT
GTGCAGCCATCATCCGACCTGATCCGAGTGCTTAACCTGTGCGATAAGCTGGCACAGAAGCGTAACGACAACTTTATCTC
ATCAGAATTATTTGTTTTGGCAGCCTTGGATTCACGTGGCTCGCTGGCGGACATATTGAAATCTGCAGGCGTCACCAACG
AAAAGCTCACCAAAGCGATTGAACAACTTCGTGGAGGCGACAACGTGAACGATCAGGGTGCTGAAGATCAGCGTCAGGCT
TTAAAGAAATATACGATCGATCTCACCGAGCGCGCCGAGAAAGGCAAGCTCGATCCGGTGATTGGGCGTGATGAAGAGAT
TCGCCGTACCATTCAGGTACTGCAACGTCGTACTAAAAACAACCCCGTGTTGATTGGTGAGCCCGGCGTAGGTAAAACCG
CCATCGTCGAAGGGCTGGCGCAGCGCATTATCAATGGTGAAGTGCCGGAAGGGCTGAAAGGCCGCCGTGTGCTGGCACTG
GATATGGGCGCGCTGGTGGCAGGGGCTAAATACCGTGGTGAATTCGAAGAGCGTCTAAAAGGCGTGCTCAGCGACCTGTC
CAAGCAGGAAGGCAACGTCATTCTGTTTATTGATGAGCTGCATACTATGGTGGGCGCGGGTAAAGCAGATGGGGCAATGG
ACGCCGGCAATATGCTGAAGCCTGCGCTGGCGCGCGGCGAGTTACACTGTGTCGGCGCTACCACGCTGGACGAATATCGC
CAGTATATCGAGAAAGACGCAGCGCTGGAGCGCCGTTTCCAGAAAGTGTTTGTGGCAGAGCCCAGCGTTGAAGATACCAT
CGCGATTTTGCGGGGTTTGAAAGAGCGTTATGAGTTGCACCATCATGTGCAGATCACTGACCCGGCTATCGTCGCGGCAG
CAACGCTTTCTCATCGCTACATAGCCGATCGCCAGTTGCCAGATAAGGCGATTGACCTGATTGATGAGGCGGCATCCAGT
ATCCGTATGCAGATTGACTCCAAGCCGGAAGCGCTGGATCGTCTGGAGCGCCGTATTATTCAGCTGAAGCTGGAACAGCA
GGCGTTAAAGAAAGAATCTGATGATGCCAGCGTCAAACGTCTGGATATGCTGGAAGCCGAGCTAAACCAGAAAGAGCGTG
AATATGCCGAGCTGGAAGAAGAGTGGAAAGCGGAAAAGGCCTCGTTGACCGGCACGCAGAATATCAAAGCGGAGCTGGAG
CAGGCGCGCCTTACCCTTGAGCAGGCACGTCGCTCAGGCGATCTGGCACAGATGTCTGAACTGCAGTACGGCAAGATCCC
GGCGCTGGAGAAACAGCTGGCTTCCGCTACACAGTCTGAAGGCAAGACGATGAAGCTGCTGCGTAACCGCGTAACGGACG
TTGAGATTGCCGATGTTCTGGCGCGCTGGACCGGTATTCCGGTCGCCCGGATGATGGAAGGGGAGCGCGACAAACTTCTG
CGCATGGAGCAGGAACTGCATTCACGAGTCATCGGACAGGATGAAGCGGTTGAAGCGGTTTCCAATGCCATTCGCCGTAG
CCGCGCAGGTCTGGCCGATCCTAATCGTCCTGTCGGGTCGTTCCTGTTCCTGGGCCCAACAGGTGTGGGTAAAACGGAAC
TGTGTAAATCACTGGCTAACTTCCTGTTCGACAGTGACGATGCGATGGTTCGTATCGACATGTCAGAATTTATGGAAAAA
CATTCTGTGTCGCGGCTGGTGGGCGCACCTCCGGGTTATGTCGGCTATGAAGAGGGCGGCTATCTGACTGAAGCGGTTCG
CCGTCGTCCTTATTCTGTGATCCTGTTGGATGAAATCGAGAAGGCGCATCCCGATGTCTTCAATATTTTGCTGCAGGTTC
TGGATGATGGCCGGTTGACGGACGGACAAGGGCGCACCGTTGATTTCCGCAATACGGTCGTGATCATGACCTCTAACCTG
GGCTCAGATTTAATTCAGGAACGTTTCGGCAATCTGAATTATCCCGAGATGAAAAATCTGGTGATGGGCGTAGTGGGTCA
ACATTTCCGTCCAGAGTTCGTGAACCGTATTGACGAGGTAGTGGTGTTCCATCCGCTGGGTGAAAAACACATTGCGTCTA
TTGCACAGATTCAACTGCAGCGGCTGTACAAACGTCTGGAAGACCGAGGCTATCAGCTGCATATCTCTGATGCGGCGATC
AAACTGTTGGGCGAAAACGGTTATGACCCGGTTTACGGTGCGCGTCCACTGAAACGCGCAATCCAGCAGCAGATAGAAAA
CCCACTGGCACAGCAGATTCTTTCTGGTGAGCTGGTCCCGGGCAAAGTGATTGAGATGGACGTAAAAGACGACGTCATTA
CTGCCCACCAGTAA

Protein sequence :
MRLDRLTNKFQLALSDAQSLALGQDNQFIEPLHLMSALLKQEGSSVAPLLSSAGTDVASLRTQIDQAIDRLPQVEGSGGD
VQPSSDLIRVLNLCDKLAQKRNDNFISSELFVLAALDSRGSLADILKSAGVTNEKLTKAIEQLRGGDNVNDQGAEDQRQA
LKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL
DMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS
IRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVKRLDMLEAELNQKEREYAELEEEWKAEKASLTGTQNIKAELE
QARLTLEQARRSGDLAQMSELQYGKIPALEKQLASATQSEGKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLL
RMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTELCKSLANFLFDSDDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQERFGNLNYPEMKNLVMGVVGQHFRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQLHISDAAI
KLLGENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIEMDVKDDVITAHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-96 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-96 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_g1025 YP_005991776.1 Chaperone protein clpB VFG2084 Protein 2e-98 41