Gene Information

Name : PAGR_p013 (PAGR_p013)
Accession : YP_005990532.1
Strain :
Genome accession: NC_017553
Putative virulence/resistance : Virulence
Product : periplasmic iron-binding protein YfeA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 13609 - 14517 bp
Length : 909 bp
Strand : +
Note : -

DNA sequence :
ATGGTGAGTAAATTATCGGTTTCAACACTTGGCATGATGTTGAGTGTTTTTATTAGCCTCAACAGCTATGCGGCTGATAA
ATTTAAGGTCGTCACGACCTTCACCGTTATTGCTGACATGGCAAAAAATGTGGCAGGGGAGGCGGCTGAGGTCACGTCAA
TCACCAAACCTGGTGCCGAAATTCATGAGTATCAACCGACCCCAGGCGATATTAAACGTGCACAGGGTGCACAGCTGGTG
ATGGCTAATGGTTTGAATCTGGAATTGTGGTTTCAACGTTTTTATCAACATCTCAAAGGCGTTCCTGAAGTTGTTGTTTC
AACGGGCGTTTCTCCGATAGGAATAGGGGAAGGACCTTATAATGGCAAACCCAATCCTCACGCATGGATGTCACCGGATA
ACGCACTGATCTATGTGGATAATATTCGTGATGCGCTTGTAAAGCACGATCCGGCCAATGCCAGCACCTATCAGCAGAAC
GCAGCCGCCTATAAGCAAAAGATCGTTGCAGCACTCGAACCTGTTCGTAAGCAACTCGCCGCCATACCAGAAAACAAACG
CTGGATAGTGACCAGCGAAGGCGCTTTTTCCTATCTGGCACGTGATTTAGGGCTTAAAGAACTTTATCTCTGGCCAATCA
ATGCCGATCAGCAGGGAACGCCACAGCAGGTTCGGAACGTCATCGATCAGATGAAAAAGAATGCCATTCCCGTCATCTTC
AGTGAAAGCACCGTCTCCGATAAACCTGCACGCCAGGTCGCGCGCGAAACGCACGCACATTATGGCGGTGTGTTATACGT
TGACTCATTAAGCGCGGCCAGGGGGCCTGTGCCAACGTATCTTGACCTGTTGAAAGTTACCACCCAGACGCTGGTTAACG
GCATTCAGGACGGGATGAAAACACCATGA

Protein sequence :
MVSKLSVSTLGMMLSVFISLNSYAADKFKVVTTFTVIADMAKNVAGEAAEVTSITKPGAEIHEYQPTPGDIKRAQGAQLV
MANGLNLELWFQRFYQHLKGVPEVVVSTGVSPIGIGEGPYNGKPNPHAWMSPDNALIYVDNIRDALVKHDPANASTYQQN
AAAYKQKIVAALEPVRKQLAAIPENKRWIVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRNVIDQMKKNAIPVIF
SESTVSDKPARQVARETHAHYGGVLYVDSLSAARGPVPTYLDLLKVTTQTLVNGIQDGMKTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-108 75
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-108 75
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-108 75
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-109 75
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-108 75

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_p013 YP_005990532.1 periplasmic iron-binding protein YfeA BAC0349 Protein 8e-109 75
PAGR_p013 YP_005990532.1 periplasmic iron-binding protein YfeA BAC0439 Protein 8e-89 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAGR_p013 YP_005990532.1 periplasmic iron-binding protein YfeA VFG0525 Protein 8e-109 75