Gene Information

Name : kdpA (LIF_A2516)
Accession : YP_005989279.1
Strain :
Genome accession: NC_017551
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase chain A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3090886 - 3092559 bp
Length : 1674 bp
Strand : -
Note : -

DNA sequence :
ATGGTAACGGAATGGATTCAACTTTTGATCTTTCTATTTGCGCTCCTAATTTTTTCTCCTTTATTCGGTCTTGGATTGTA
TAAAGTGTATTTATATAAAACTTCTGGTTTTGAAAAATTTTTGTATAAAATTTGTGGGATCGATCCCAATCGAAATATGG
ATTGGAAAGAATATGCTCTATCTTTGCTCGTATTCAATTTTTTCGGTTTTTTACTATTGTTTTTAATTCTATTTTTTCAA
AATTATCTTCCACTCAATCCAGAAAATTTTCCAGGATTAGTTTGGGATCTTGCGTTTAATACCGCGGTCAGTTTTGCCAC
AAATACGAACTGGCAGGCTTATAGTGGAGAATCTACGTTAAGTTTTTTTTCCCAAATGGCAGGATTGACCACACAAAATT
TTCTTAGCGCAACTACTGGATTGTGCGTACTTCTTGCGCTTTCAAGAGGAATATCAGTAAATTATAATGTTTTTGCTTTG
GGAAATTTTTGGAAGGATATGATTCGAGGAACGTTATACGTTCTTCTTCCTCTCTCTTTTATTTTTGCTTTGTTTTTGGT
TGGCTTTGGAGTTGTACAAACTTTTTCCGAATCCGTTTCCGCGATTACTTTAGAAGGAAATACACAAATAATTCCTTTAG
GACCGGTTGCGTCTCAGGTAGCCATCAAACAATTAGGAACAAACGGTGGTGGATATTTTGGAGTAAACGCATCGCATCCT
TTTGAAAACCCTTCTCCAATTTCAAATTTTCTACAAATGTTTTCCATTCTGATTTTGCCAGGCGCTTGTGTTTTTTTATA
CGGAAGAATAACCGGAAGTATCAGACACGCATGGGCAATTTTCAGCGTGATGTTTACGATACTCTGTGTTGGAATTTTAA
TTGTCTGGACTTTTGAATCTTCTTGGAACCCGATCAGCGGTACGTTAGGTTTTTGGGAAGGAAAAGAAATTAGATTTGGA
ATTTTAAACAGTTCTATTTGGGAAGTTGCCACAACTGTGGCGTCTAACGGATCTGTAAACTCTATGCACGATAGTTTTTC
TCCGATTGGTGGTCTAGTAGGAATATTGAATATACAACTAAGAGAAATTGTATTTGGAGGAGTAGGGGCTGGGATGTATG
GAATGATACTTTTTGTTTTGCTGACCGTATTTTTAAGCGGGATAATGGTGGGACGCAGCCCGGAATATTTAGGTAAAAAA
ATAGAAAAGAGAGAAATTCAAATGTCTATCTTGGGAATTTTATTACCTTCTACAATTATACTTTTGTTTACTGCAATTTC
GGTAAGTGTCTCGGACGCGTTATCTTCTCTTACAAATCGAGGCCCTCACGGTTTATCAGAAATTCTTTATGCGTTTTCTT
CGGGAGCGGGAAATAATGGAAGTGCTTTTGCTGGTCTGAACGCAAATACTACTTATTATAATGTTATGATTGCGATTGCG
ATGATATTAGGAAGATTTGGAGTGATTCTACCTGTTTTAGTAATTGCTGGAAGTCTCGCTCAGAAAAAAAGATCGGAGAT
CGTATCGGAAGGTTCTTTTTCTACAGAAGGAGGGACCTTTTATATTTTGTTATTGTCAGTTATTATCATAGTAGGCGCGC
TTACTTTTTTTCCGGTGCTTACGATTGGGCCGATACTTGAGCATTTTATAATGTTTCAGAATCTGACTTTTTAA

Protein sequence :
MVTEWIQLLIFLFALLIFSPLFGLGLYKVYLYKTSGFEKFLYKICGIDPNRNMDWKEYALSLLVFNFFGFLLLFLILFFQ
NYLPLNPENFPGLVWDLAFNTAVSFATNTNWQAYSGESTLSFFSQMAGLTTQNFLSATTGLCVLLALSRGISVNYNVFAL
GNFWKDMIRGTLYVLLPLSFIFALFLVGFGVVQTFSESVSAITLEGNTQIIPLGPVASQVAIKQLGTNGGGYFGVNASHP
FENPSPISNFLQMFSILILPGACVFLYGRITGSIRHAWAIFSVMFTILCVGILIVWTFESSWNPISGTLGFWEGKEIRFG
ILNSSIWEVATTVASNGSVNSMHDSFSPIGGLVGILNIQLREIVFGGVGAGMYGMILFVLLTVFLSGIMVGRSPEYLGKK
IEKREIQMSILGILLPSTIILLFTAISVSVSDALSSLTNRGPHGLSEILYAFSSGAGNNGSAFAGLNANTTYYNVMIAIA
MILGRFGVILPVLVIAGSLAQKKRSEIVSEGSFSTEGGTFYILLLSVIIIVGALTFFPVLTIGPILEHFIMFQNLTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 7e-86 49
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 9e-86 49
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 9e-57 41
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-56 41
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-56 41
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-56 41
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-56 41