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Name : gspE (LIF_A1940) Accession : YP_005988717.1 Strain : Genome accession: NC_017551 Putative virulence/resistance : Virulence Product : type II secretory pathway ATPase protein E Function : - COG functional category : - COG ID : - EC number : - Position : 2347409 - 2349082 bp Length : 1674 bp Strand : - Note : - DNA sequence : TTGAAAACTCTCGGAGATATCCTAATCGAAGAGGGGATCATATCTGAAAAAGATCTGGAAGATTCCCTAAAGGTTCAGAA AAAAAACAACCTTCCACTCAGTCATATCATTCAGAAAAAAGGAATCGCCGGAGAAGCAGATATTCTCCGCGCCCTATCCA AACTCTATCAACTCGAGTTCAGAGAAAAGTTAGAGTTTACGGGTATGGAAGAAATATTTTTACAAATTCCTCTAAAACTC ATTCAGAAAAGTAGAATCGTTCCGTTTTCTCTTTCTAAAAAAACAATTCGAATTGCTGTATCCGATCCTTCTGATTTACA TCCGATGGATGACGCTCGTAACTTTCTAAAAGGTTACAACGTGGAATTTATTCTCGCTCCGGAACCGGAGATCATGAGAA TTATTCATTCTCATTTTGATAATACATCTTCTGCCGCCAAAGAGATGTTAAATGAGATGGAGGGAAGTTTTTCCGAACTT GCGGAAGCCTTTGAAAATGAAACCCTGGATCTAAGCGATGACGCTCCGATCATCAAAATGGTCAACGTGATCCTTTCCCA AGCGGTCAACGAAAGGGCTTCGGATATTCACATTGAACCTTACGAAAAGTCTCTCGTGGTTCGCTATCGTGTGGATGGTA TTTTGCATAACGTGCTTAGTCCTCCTAAATCGTATCACGCGGGTATTTCTTCCAGAATCAAGATCATGTCTAATTTGAAC ATCGCTGAAAATAGACTTCCTCAAGACGGAAGGATCAAACTTAGATTGGCTGGTAAGGATATAGATATCCGGGTTTCCAC CATTCCTTGTCAGTTCGGAGAACGGATCGTAATGAGGCTTTTGAATAAAACGGATCAAAAGTATTCTTTAGATACGATGG GTTTTTATCCAGAATTAATCCAGTCTTTGCGTTCGTTAATTTACGAACCTCATGGAATCATTTTAGTAACGGGACCGACC GGATCGGGTAAGTCTACTACATTATATTCTGCGTTAAGCGAACTCAATACAGAAGAAAGAAACATCATCACCTGCGAAGA TCCTGTGGAATATCAGATTGAAGGAATTTCTCAAATGCAAATGCAGGAAAAAATTGGTCTTACGTTTGCAACCGGACTTC GAGCCATCCTTCGACAAGACCCGGACGTTATCATGGTAGGTGAGATTCGAGATGAAGAAACCGCAAGAATCGCGATCCAA GCTTCTCTGACCGGTCACCTTGTTTTTTCTACGCTTCACACAAACGATGCAGCAAGTGCCGCGACTCGTTTGATCGATAT GGGAATCGAGCCCTATCTGATTACTTCCACAGTATTAGGATTTATGGCTCAAAGACTTGTAAGAGTTATCTGCACTCAAT GTAAAGAAACGTATAAACCTACCACTTCGGAACTAGAGTCCATTGGCATCTCTAAAAAATTTTTAAAGAACGGTAACTTA CATCGTGGTAAAGGTTGTTCTCATTGTATGGGAACTGGTTTTAAAGGTAGAATCGGAATTTATGAACTTTTACTTGTAAA TTCTCCTCTCAAACAAGCAATTCTTCATGGTAAAGACGCTGGACAGTTAAACGAAATCGCTCTCGAGCATGGGTTTCGAA CTCTTAAAGATTACGGAATTAGAAAGGTAGTTGATGGTGTAACTACAATCGACGAAGTTCTCAGGGTAACTTAA Protein sequence : MKTLGDILIEEGIISEKDLEDSLKVQKKNNLPLSHIIQKKGIAGEADILRALSKLYQLEFREKLEFTGMEEIFLQIPLKL IQKSRIVPFSLSKKTIRIAVSDPSDLHPMDDARNFLKGYNVEFILAPEPEIMRIIHSHFDNTSSAAKEMLNEMEGSFSEL AEAFENETLDLSDDAPIIKMVNVILSQAVNERASDIHIEPYEKSLVVRYRVDGILHNVLSPPKSYHAGISSRIKIMSNLN IAENRLPQDGRIKLRLAGKDIDIRVSTIPCQFGERIVMRLLNKTDQKYSLDTMGFYPELIQSLRSLIYEPHGIILVTGPT GSGKSTTLYSALSELNTEERNIITCEDPVEYQIEGISQMQMQEKIGLTFATGLRAILRQDPDVIMVGEIRDEETARIAIQ ASLTGHLVFSTLHTNDAASAATRLIDMGIEPYLITSTVLGFMAQRLVRVICTQCKETYKPTTSELESIGISKKFLKNGNL HRGKGCSHCMGTGFKGRIGIYELLLVNSPLKQAILHGKDAGQLNEIALEHGFRTLKDYGIRKVVDGVTTIDEVLRVT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-108 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-108 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_005988717.1 | type II secretory pathway ATPase protein E | VFG2048 | Protein | 4e-108 | 48 |
| gspE | YP_005988717.1 | type II secretory pathway ATPase protein E | VFG0182 | Protein | 9e-107 | 48 |
| gspE | YP_005988717.1 | type II secretory pathway ATPase protein E | VFG1876 | Protein | 8e-95 | 45 |
| gspE | YP_005988717.1 | type II secretory pathway ATPase protein E | VFG1880 | Protein | 3e-84 | 44 |
