Gene Information

Name : TIIST44_05000 (TIIST44_05000)
Accession : YP_005985510.1
Strain : Propionibacterium acnes ATCC 11828
Genome accession: NC_017550
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1078263 - 1079015 bp
Length : 753 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGTTGACGACAACTCGCCCACATCCGCGCGCCGCTGACACAACCATCCGTGACGCTCACCTGCGCGCCCTCGGACTGAC
GAAAACCTATGGGATGACACGTGCCCTCGATCACATCGACATCGCCATCCCAGCCGGCCAATCGGTCGCCGTCATGGGGC
CATCCGGGTCAGGAAAGACCACCCTGCTGCACTGCTTGTCGGGGATCCTCTCGCCTGACTCCGGCAGTATCGAACTGGCT
CTGCCGGACCGCACCGTCAACGTCGAAAACCTCTCTAACGAAGGCCGAGCAAAGCTACGCCGTCAATCCCTTGGTTTCGT
TTTCCAGCAAGGAATGCTCGTACCCGAGCTCACTGCTGTCGAGAACACCGCCCTACCCCTCATGCTCAACGGCGTATCCC
AAACCGATGCGGTCAGGTATGCCACCCAATGGCTTGAATCGATGGGGTTAGGCGGCATGGAGGATCGTCGGATTGGCCAG
CTCTCTGGGGGCCAAGCTCAACGCGTCACTATTGCCCGGTCCCAGGTAATCGATCCGTCGATTGTCTTCGCTGACGAACC
CACCGGAGCCCTCGACTCAGCCACCGCCGTCGAAGTCATGACCATTCTGCTTTCGGCGACGACCGGGCGGGGACGCACCC
TCGTCGTCGTCACCCATGACGAGGACGTTGCCCGCCGCTGCCAGCGCATCCTTCATCTGCACGACGGTCGGATCGTCTCT
GACCACGTACGTCATTCCGATGGGAGGTGGTGA

Protein sequence : 
MLTTTRPHPRAADTTIRDAHLRALGLTKTYGMTRALDHIDIAIPAGQSVAVMGPSGSGKTTLLHCLSGILSPDSGSIELA
LPDRTVNVENLSNEGRAKLRRQSLGFVFQQGMLVPELTAVENTALPLMLNGVSQTDAVRYATQWLESMGLGGMEDRRIGQ
LSGGQAQRVTIARSQVIDPSIVFADEPTGALDSATAVEVMTILLSATTGRGRTLVVVTHDEDVARRCQRILHLHDGRIVS
DHVRHSDGRW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-29 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-29 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-29 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TIIST44_05000 YP_005985510.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-28 45
TIIST44_05000 YP_005985510.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-28 41