Gene Information

Name : TIIST44_03270 (TIIST44_03270)
Accession : YP_005985179.1
Strain : Propionibacterium acnes ATCC 11828
Genome accession: NC_017550
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 702786 - 703484 bp
Length : 699 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAGCATGCACATTCTCGTCGTTGATGACGACCGCGCGGTGCGCGAGTCCCTCGCTCGATCCCTGCAATACAGCGGTTA
CGAGGTCGATAGCGTCGCTGACGGTGTAGAGGCTCTCGCCCATCTATCCGGAAGCCACCCCGACGCCGTCATCATGGATG
TCATGATGCCTCGTCTGGATGGCTTAGAGGCCACCCGGATGTTGCGCAGCAACGGCAACGACGTGCCGATCCTCATCCTC
ACCGCTCGCGATGCTGTCGACGATCGCGTTGACGGCCTAGACGCTGGTGCCGACGACTATATGGTCAAGCCGTTCGCCCT
CGACGAGCTCCTCGCCCGACTGCGTGCCCTCACTCGCCGTTCCCGCCCCGAACCGGGTCCGGACGAAGCCCCTGAGCAGT
TGTCCTTCGCTGACCTCACCCTTGATCCAGCCACCCGCGAGGTCACCCGCGCGAACCGTCGCATCAGTCTGACGCGTACC
GAGTTCGCCTTGCTGACCGTCTTCCTACAAAATCCGGAGAGGGTGCTGGAACGGTCCTGGCTGCTCCATGAGGTGTGGGG
ATTCGACTTCCCGACCACTGCGAACTCCCTTGAGGTGTATATCGGATATTTGCGCCGCAAAACCGAGCACGATGGTGAGG
CGCGTCTCATCCACACCGTCCGCGGTGTCGGGTACGTGCTGCGGGAAGCGAATCCGTGA

Protein sequence : 
MSMHILVVDDDRAVRESLARSLQYSGYEVDSVADGVEALAHLSGSHPDAVIMDVMMPRLDGLEATRMLRSNGNDVPILIL
TARDAVDDRVDGLDAGADDYMVKPFALDELLARLRALTRRSRPEPGPDEAPEQLSFADLTLDPATREVTRANRRISLTRT
EFALLTVFLQNPERVLERSWLLHEVWGFDFPTTANSLEVYIGYLRRKTEHDGEARLIHTVRGVGYVLREANP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TIIST44_03270 YP_005985179.1 putative two-component response regulator BAC0638 Protein 5e-30 43
TIIST44_03270 YP_005985179.1 putative two-component response regulator BAC0125 Protein 2e-31 42
TIIST44_03270 YP_005985179.1 putative two-component response regulator BAC0083 Protein 1e-34 42
TIIST44_03270 YP_005985179.1 putative two-component response regulator HE999704.1.gene1528. Protein 9e-35 41
TIIST44_03270 YP_005985179.1 putative two-component response regulator BAC0308 Protein 1e-31 41
TIIST44_03270 YP_005985179.1 putative two-component response regulator BAC0197 Protein 4e-28 41
TIIST44_03270 YP_005985179.1 putative two-component response regulator AE000516.2.gene3505. Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TIIST44_03270 YP_005985179.1 putative two-component response regulator VFG1390 Protein 3e-69 69
TIIST44_03270 YP_005985179.1 putative two-component response regulator VFG1386 Protein 2e-43 45
TIIST44_03270 YP_005985179.1 putative two-component response regulator VFG1389 Protein 7e-42 45
TIIST44_03270 YP_005985179.1 putative two-component response regulator VFG0596 Protein 4e-30 41