Gene Information

Name : TIIST44_01580 (TIIST44_01580)
Accession : YP_005984851.1
Strain : Propionibacterium acnes ATCC 11828
Genome accession: NC_017550
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 340877 - 341872 bp
Length : 996 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
ATGGATCAGCGATGGGACGACGCTATGGCGCTCGCCTTGGATATGGCCGCGAAATCACCATGCCCGGATCCGAACCCGCG
TGTCGGCTGTGTCATTGTCGCTGAGGACCGGGTGATAGGTCAGGGTTGGCACCGTGGAGCGGGAACTCCACACGCTGAGG
TGGAGGCATTGCGCCAGGCTGGCGATGATGCCAGGGGAGCCACCGCCGTCGTCACCTTGGAGCCCTGTCATCACACCGGG
CGTACCGGACCGTGCAGCCATGCCCTGGTCGACGCTGGGATTGCCCGGGTTGTCATCGCCCAGTCGGATCCCAACCCGGT
GGCATCCGGGGGAGAACAGTGGCTGCGTACCCACGGCGTCGAGGTGGTCACCGGAGTTCTTTCCGAGGAAGCCACAGCCC
TCAACGCCGATTGGACCTTCAGCCAGATCCACCGACGCCCCCGGGTGTGCTGGAAGTACGCCGCGAGCCTCGACGGACGC
AGCGCCGCCCCCGACGGAACCAGCCAGTGGATCACCGGGGAACAGGCCCGCCACCAGGTGCAGCTCGGCCGGGCTCGGTG
CGGGGCGATCATCGTCGGCACCGGAACTGCCCTGGCCGACAACCCGAGGCTGACGGTTCGGCTGCCCGGCGTCACCCACC
AACCCCTACGAGTCGTGGTGGGCATGCGAGAACCGCCTGCTGGGTGTCATTTACGTGACGATTCGGCCTCGACCTTGCAC
ATTCCCAGCCACGACCCTGCTGAGGTGCTCGACCTCCTGTGGTGCCGCGGTGTTCACCGTGTCTGGCTGGAGGGCGGACC
ACAACTGGCCGGGGCCTTCCTCGCGGCCAACCTGATCGACGAGGTCATCGCCCACATGGCACCGACGGTGTTGGGAGGCG
GCCGAGTAGCGATCGTCGACCCTACCGTCGCCACTTTGTCCCAGGCGCACCACTTCGTCATCGACGACGTGACCCAGTTG
GGCCCCGACATCCAGATTCACGCACATCATGAGTGA

Protein sequence :
MDQRWDDAMALALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHRGAGTPHAEVEALRQAGDDARGATAVVTLEPCHHTG
RTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRTHGVEVVTGVLSEEATALNADWTFSQIHRRPRVCWKYAASLDGR
SAAPDGTSQWITGEQARHQVQLGRARCGAIIVGTGTALADNPRLTVRLPGVTHQPLRVVVGMREPPAGCHLRDDSASTLH
IPSHDPAEVLDLLWCRGVHRVWLEGGPQLAGAFLAANLIDEVIAHMAPTVLGGGRVAIVDPTVATLSQAHHFVIDDVTQL
GPDIQIHAHHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-39 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-39 41