Gene Information

Name : NCGM2_0929 (NCGM2_0929)
Accession : YP_005979190.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1017258 - 1018217 bp
Length : 960 bp
Strand : -
Note : similar to GI:116052803; similar to PA14_61610 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGCACGAATCTCACCACCCTTCCCTGACGCCCCGACTCGGCATCAGCGCCTGCCTGCTCGGCGAACCGGTGCGCTTCAA
CGGCGGCCACAAGCGATCCGCGCTTTGCGAGGAACTGGCGCGGCACGTCGAGTTCGTCTCCTTCTGCCCGGAACAGGCCA
TCGGCCTGGGCACGCCGCGCCCGGCGATTCGCCTGGAAGGCACTCCGGAAGCCGCCGAGGCGCGGAGCCGCGACGGCCTG
GCGGTCGGCGGAGCGCTCGCCGAATATGCGCGGCGGGTGGCGCAACGGGCGGATACGCTGGACGGTTTCATCTTCATGCA
ACGTTCGCCGTCCTGCGGGCTGCAACGGGTCAAGGTCTATCCAGAAGGCGGCGGCGCGCCGCGCGCCGAAGGCCGTGGAC
GCTTCGCCGCAGCCCTTTGCGAAGCCTTGCCGGAGCTACCGGTGGAAGAAGAAGGCCGGCTGCACGATCCGGTCCTGCGG
GAGAACTTCCTCACCCGCGTGTTCGCCCATGCCCACTGGCAGGCCCTGTGCCAGCGCGGCCTCAGCCATTCGGCCATCGT
CGCCTTCCATAGCCGCTACAAGTACCAGTTGCTGGCGCATTCGCCGGAGCACTACCGCAGTCTCGGCCGCCTGCTCGGCG
AAGCCGGCCACTACCAGCCGGAAGCCCTCGGCACGCGTTACTTCGGCGAGCTGATGCAGGGCCTGCGCCGCTGCGCGACC
CGCGGCAGCCATGGCAACGTGTTGCTGCACCTGAGCGGCTACCTGAAACGCGACCTCGCAGCCGAAGACAGGCGTGAATT
GCGCGAGCTGATCGAGCAATACCGGCATGGCAGCGTGCCGCTGGTGGTACCGCTGACCCTGCTAAAGCACCACTTCCGTC
GCCACCCGCATGCATACATCGCCCAGCAGGCCTACCTGCAACCGCACCCGACCGAACTCGGCCTGCGCAACGCGCTCTAG

Protein sequence :
MHESHHPSLTPRLGISACLLGEPVRFNGGHKRSALCEELARHVEFVSFCPEQAIGLGTPRPAIRLEGTPEAAEARSRDGL
AVGGALAEYARRVAQRADTLDGFIFMQRSPSCGLQRVKVYPEGGGAPRAEGRGRFAAALCEALPELPVEEEGRLHDPVLR
ENFLTRVFAHAHWQALCQRGLSHSAIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQPEALGTRYFGELMQGLRRCAT
RGSHGNVLLHLSGYLKRDLAAEDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPHAYIAQQAYLQPHPTELGLRNAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 5e-51 46
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 7e-51 46
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 9e-51 46
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 7e-51 46
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 7e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NCGM2_0929 YP_005979190.1 hypothetical protein VFG0490 Protein 4e-51 46