Gene Information

Name : NCGM2_0092 (NCGM2_0092)
Accession : YP_005978369.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 109324 - 111183 bp
Length : 1860 bp
Strand : +
Note : similar to GI:116053808; similar to PA14_01070 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGAACCCGCGCCTGCTCGAGTACTACAACCAGGAATTGCAACACATCCGCGAAAGCGCCGCGGAGTTCGCCGAGGAGTT
CCCGAAGATCGCCGGGCGCCTGTCGCTGTCCGGCTTCGAGTGCGCCGACCCCTACGTCGAGCGCCTGCTGGAAGGTTTCG
CCTATCTCACCGCGCGGGTCCAGCTGAAGCTCGACGCGGAGTACCCGACCTTCACCCACAACCTGCTGGAAATCGCCTAC
CCGCACTACCTGGCGCCGACTCCGTCGATGACCGTGGTGCAGCTGCGCCCGGACCCCAACGAAGGCGCCCTGAGCAGCGG
CTTCAGCGTCGAGCGCGGGGCCTCCCTGCGCGGCCAGCTCGGCCCCGATGACCAGACCGCCTGCGAATACCGCACCGCCC
ACCCGGTGACCCTGTGGCCGCTGGAAGTGGCCCAGGCCGACTACTTCGGCAATCCCGCCGCGGTGCTCGGCCGCCTCGCC
GCCAGCGAGCCGCGGGCCAAGGCCGGCCTGCGCATCCGCCTGCGCAGCGGCGCCGGTATCCCGTTCGACAGCCTGTCGCT
GGACGCCCTGCCGCTCTACCTGCACGGCGCCGACGAACAACCCTACCGCCTCTACGAACAATTGCTCGGCAACGCCTGCG
CGGTGTTCGTCCGCGCCCCGGACAATGCCTGGGTCGAACGCCTGCCGACGAGCAGCCTGCGTGCGCGCGGCTTCGACGAC
GAGGACGCGCTGCTGCCGGTGGTGCCGCGGGCGTTCCAGGGCTACCGCCTGCTGCAGGAATACTTCGCCCTGCCGGCGCG
CTTCCTGTTCGTCGAGTTCTCCGGCCTGAACCGCGCCCTGCGTCGATGCCACGGCGAGGAGCTGGAACTGGTCGTGCTGT
TCGGCAAGCACGACCAGCGCCTGGAGGGCACGGTGGACGCGGAGCAACTGGTGCCGTTCTGCACCCCGGCGATCAACCTG
TTCCCGCGCCGCTGCGACCGCATCCACCTGTCCGACCGGGTCAACGAGCATCATGTGATCGTCGACCGCACCCGTCCGCT
GGATTTCGAGGTGCATTCGCTGCAACAGGTGAGCGGCCACGGCAGCGGTCCGGAGCAACCCTTCCAACCGTTCTACGCGG
TGCGCGACCCGGCGCGCTACGGCCGCGAGCAGGCCTACTTCAGCGTGCGTCGCGAACCGCGCGTGCTGTCCAGCAAGCAG
CGGCGCAAGGGCCCGCGCTCGACCTACGTCGGCAGCGAGACCTTCGTCGCCCTGGTCGACGCCAACCAGGCGCCCTATCG
CCACGACCTGCGCCAGCTCGGCATCGCCGCGCTGTGCACCAACCGCGACCTGCCGCTGTTCATGCCGATCGGCGCGCACA
AGAGCGACTTCACCCTGGAGGACAGCGCGCCGGTCATGCAGGTGCGCTGCCTCGCCGGACCGAGCCGGCCGCGCGCCAGC
CGTGCCCACGATGCCAGCGCCTGGCGGCTGATCAGCCAGCTGTCGCTGAACTACCTGTCGTTGGCCGAGCGCGGCCAGGG
CGCCGCCGCCCTGCGCGAGCTGCTGCGGCTCTACGGCGACAGCGGCGATCCGGCGCTGCAACTGCAGATCGAGGGCCTGC
GCGAGGTCAGCAGCAAGCCTTGCACGCGGCGCCTGCCGATGCCCGGGCCGATCGTCTTCGGCCGTGGCCTGGAGATCACC
CTGGACTTCGACGAGAACGCGTTCCGCGGCACCGGGGTGTTCCTCCTCGGCGCCGTGTTCGAGCGCTTCCTGGCACGCTA
CGTGTCGATCAACAGCTTTACCGAGACGGTGCTGCGCACCGGCGAACGGGGCGAGGTGATGAGATGGCAGGCGAAGCCGG
GCAGCCGTCCGAACCTCTGA

Protein sequence :
MNPRLLEYYNQELQHIRESAAEFAEEFPKIAGRLSLSGFECADPYVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAY
PHYLAPTPSMTVVQLRPDPNEGALSSGFSVERGASLRGQLGPDDQTACEYRTAHPVTLWPLEVAQADYFGNPAAVLGRLA
ASEPRAKAGLRIRLRSGAGIPFDSLSLDALPLYLHGADEQPYRLYEQLLGNACAVFVRAPDNAWVERLPTSSLRARGFDD
EDALLPVVPRAFQGYRLLQEYFALPARFLFVEFSGLNRALRRCHGEELELVVLFGKHDQRLEGTVDAEQLVPFCTPAINL
FPRRCDRIHLSDRVNEHHVIVDRTRPLDFEVHSLQQVSGHGSGPEQPFQPFYAVRDPARYGREQAYFSVRREPRVLSSKQ
RRKGPRSTYVGSETFVALVDANQAPYRHDLRQLGIAALCTNRDLPLFMPIGAHKSDFTLEDSAPVMQVRCLAGPSRPRAS
RAHDASAWRLISQLSLNYLSLAERGQGAAALRELLRLYGDSGDPALQLQIEGLREVSSKPCTRRLPMPGPIVFGRGLEIT
LDFDENAFRGTGVFLLGAVFERFLARYVSINSFTETVLRTGERGEVMRWQAKPGSRPNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 7e-118 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NCGM2_0092 YP_005978369.1 hypothetical protein VFG2074 Protein 0.0 99