Gene Information

Name : NCGM2_0850 (NCGM2_0850)
Accession : YP_005979118.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 928773 - 929678 bp
Length : 906 bp
Strand : -
Note : similar to AA sequence:RefSeq:YP_002354016; similar to LysR family transcriptional regulator [Thauera sp. MZ1T]

DNA sequence :
ATGGAAATTCGACACCTGCGCTACTTTCTGGCGGTGGCAGAGGAGCTGCACTTTGCCCGAGCCGCAGAGCGCCTCCACAT
AGAGACATCGCCGCTGTCGCGCGCCATCAAGGAACTTGAGGAAGAGTTGGGCGTAGCGCTATTTGCGAGAACCACTCGGA
GCACCCGCTTGACTCGTGCGGGCAGGCTCTTCTTTGAGAGCGTGCCGCGTGTCTTCGCAGCTTTGCAGCAGGCGCGCGAC
AGTGTGAACGCCGCAGCCAATGGCTTTCATTGCCAGCTCCGTATTGCATTGTCTGATGGAATCACGCCATCGCGCCTGCC
TGCGTTGTTGGCGCTCTGCCGGCAGGAAGAGCCGGAAGTGGAAGTTCGCTTCTTCGAGGTGCCTTTGGCACAGCAAATCA
AGGGATTGTGTGGCGAACTGTACGATCTCGGCTTCGCTCAATCGGATGAAGTCGGCGAAGGCATCATCGCCGTGCCGGTG
TGGAGTGACCCTCTGATGGTAGCTGTGCCCGCACGGCACCCCTTGCTATCCCACAAACAGATTCCCCTAGAAGAGCTGTT
GCGGTATCCGCTGGTGCTCTGCGACGCGGTGGCGTGTGAGGGCCATGCTCGGCAAGTTGAACGGGTGCTACGTCGCGTGG
ACATAGAGCCACTGATTGCCGAACGCGTGACTTCCAGCGATCTAATGATGGTCCTGGTTTCGGCGGGACTTGCACTAGGC
CTCACAGGAGGCGCGCATATCACAGCCAGCAGGGAACAGGGGGTGGTCGCACGGCCGCTGACTGGACGTTCGCCAATGCT
CACGACCTATCTACTACGGCCGGCCAGCGAGCCGTCAGAAATGCTGACTCGCTTCATGGAACGCGTTCATTCGATCAAAT
CTCCAGATGCCAAAGGTCGGCGGTAA

Protein sequence :
MEIRHLRYFLAVAEELHFARAAERLHIETSPLSRAIKELEEELGVALFARTTRSTRLTRAGRLFFESVPRVFAALQQARD
SVNAAANGFHCQLRIALSDGITPSRLPALLALCRQEEPEVEVRFFEVPLAQQIKGLCGELYDLGFAQSDEVGEGIIAVPV
WSDPLMVAVPARHPLLSHKQIPLEELLRYPLVLCDAVACEGHARQVERVLRRVDIEPLIAERVTSSDLMMVLVSAGLALG
LTGGAHITASREQGVVARPLTGRSPMLTTYLLRPASEPSEMLTRFMERVHSIKSPDAKGRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-57 53
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 4e-38 41