Gene Information

Name : smpB (NCGM2_0766)
Accession : YP_005979037.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 843004 - 843483 bp
Length : 480 bp
Strand : -
Note : similar to GI:116052915; similar to PA14_63060 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGGCTAAGCAGAAGAAACACCCTTCGGGGACCATCGCGCAGAACAAGAAGGCTCTGCACGACTATTTCATCGAACAACG
CTTCGAGGCGGGCGTCGCCCTGGCGGGCTGGGAAGTGAAAAGCCTGCGCGCCGGCAAGGCCCAACTGGTCGACAGCTACG
TGCTGCTCAAGGATGGCGAGGCCTGGCTGCTCGGCAGCCACATCACGCCCCTGACCACCGCCAGCACGCACGTGATCGCC
GACCCGGTGCGCACGCGCAAGCTGCTGCTGCACAAGCGCGAACTGGGCAAGCTGTTCGGCGCCGTGCAACAGAAGGGCTA
CGCCTGCGTCGCCCTGTCGATGTACTGGAAGAAGCACCTGGTCAAGTGCGAGATCGCCCTGGCCAAGGGCAAGAAGGACT
TCGACAAGCGCCACACCGAGAAGGAGCGCGACTCCGATCGGGAGATCCAACGCGCCATGCGCCACGGCAAGGACGACTGA

Protein sequence :
MAKQKKHPSGTIAQNKKALHDYFIEQRFEAGVALAGWEVKSLRAGKAQLVDSYVLLKDGEAWLLGSHITPLTTASTHVIA
DPVRTRKLLLHKRELGKLFGAVQQKGYACVALSMYWKKHLVKCEIALAKGKKDFDKRHTEKERDSDREIQRAMRHGKDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 5e-35 55
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-25 46
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 7e-25 45