Gene Information

Name : NCGM2_6284 (NCGM2_6284)
Accession : YP_005984473.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : putative TonB-dependent receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6688489 - 6689271 bp
Length : 783 bp
Strand : +
Note : similar to GI:116053655; similar to PA14_72640 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGAAAAAACTGCTTGCTGCTTTCTCCGCTGTCGCGGCGCTCGGCCTCACCGCCGCCCAGGCCGCCGAGTCCCTCACCGT
CGCGGCCACCCCGGTGCCGCACGCGGAGATCCTCAACGTGGTCAAGCCGCTGCTGGCCAAGGAAGGCGTGGACCTGAAGA
TCAAGGAGTTCACCGACTACGTGCAGCCGAACGTGCAGGTCTCGGAAAAGCGCCTGGACGCCAACTTCTTCCAGCACCAG
CCGTACCTCGATGAGTTCAACAAGGCCAAGGGCACCGACCTGGTCGCCGTGACCGGCGTACACATCGAGCCGCTGGGCGC
CTACTCGAGCAAGTACAAGAAGCTCGACGAACTGCCTTCCGGCGCTACCGTGGTGATCCCCAACGACGCCACCAACGGCG
GCCGCGCCCTGCTCCTGCTGGACAAGGCCGGGGTGATCAAGCTCAAGGACAACAAGAGCATCACCGCCACGCCGAAGGAC
ATCGTCGACAATCCGAAGAACATCAAGATCCGCGAACTGGAAGCCGCGACCCTGCCGCGCGTGCTGACCCAGGTCGACAT
GGCGCTGATCAATACCAACTACGCCCTGGAAGCCAAGCTGAACCCGACCAAGGATGCGCTGGCCATCGAAGGCAGCGACT
CGCCCTACGTGAACATCCTGGTCGCGCGGCCGGACAACAAGGACAGCGACGCCATGCAGAAGCTGGCCAAGGCCCTGCAC
AGCGCCGAGGTCAAGCAGTTCATCCAGGAGAAATACAAAGGCGCGGTGGTGCCGGCGTTCTGA

Protein sequence :
MKKLLAAFSAVAALGLTAAQAAESLTVAATPVPHAEILNVVKPLLAKEGVDLKIKEFTDYVQPNVQVSEKRLDANFFQHQ
PYLDEFNKAKGTDLVAVTGVHIEPLGAYSSKYKKLDELPSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKSITATPKD
IVDNPKNIKIRELEAATLPRVLTQVDMALINTNYALEAKLNPTKDALAIEGSDSPYVNILVARPDNKDSDAMQKLAKALH
SAEVKQFIQEKYKGAVVPAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 4e-44 44
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 1e-38 42