Gene Information

Name : abc (NCGM2_6282)
Accession : YP_005984471.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : putative ATP-binding component of ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6686728 - 6687735 bp
Length : 1008 bp
Strand : +
Note : similar to GI:116053653; similar to PA14_72620 of P. aeruginosa UCBPP-PA14

DNA sequence :
GTGATCGAATTCCACGACGTCCACAAGACCTATCGAGTTGCCGGTCGGGAAATCCCCGCCTTGCAACCGACCCGCCTGAA
CATCCAGGCCGGGCAGATTTTCGGCCTGATCGGCCATTCCGGTGCCGGCAAGAGCACCCTGCTGCGCCTGATCAACCGCC
TCGAGGAGCCCAGCGGCGGCCGCATCCTGGTCGAGGGCGAAGACGTCACCGCCCTCGACGCCGAAGGCCTACGCCGTTTC
CGCCAGCGCGTCGGGATGATCTTCCAGCACTTCAACCTGCTGTCCTCGAAGACCGTCGCCGACAACATCGCCATGCCCCT
GCGCCTGGCCGGCGGCTTCAGCCGTGCCGAAGTCGATGCACGGGTTTCCGAGCTGCTCGCGCGGGTCGGCCTGTCCGACC
ACGCGCGCAAGTATCCGGCCCAGCTCTCCGGCGGACAGAAACAGCGCGTCGGCATCGCTCGCGCCCTGGCCTGCCGGCCG
AGCATCCTGCTCTGCGACGAGGCCACCAGCGCCCTCGATCCGCAGACCACCGCCTCGGTCCTGCAACTGCTGGCGGAAAT
CAATCGCGAGCTGAAGCTGACCATCGTCCTCATCACCCACGAGATGGACGTGATCCGTCGTGTCTGCGACCAGGTCGCGG
TCATGGACGGCGGCGCCATCGTCGAGCAGGGCGATGTCGCCGATGTCTTCCTCCATCCGCAGCACCCGACCACCCGCCGC
TTCGTGTTCGAGGCCGAACGGGTCGACGAAGACGAGCGTCACGACGATTTCGCCCACGTGCCGGGTCTCATCCTGCGCCT
GACCTTCCGCGGCGAAGCCACCTATGCGCCACTGCTGGGCACCGTGGCTCGGCAGACCGGGGTCGACTACAGCATCCTTT
CCGGACGCATCGACCGCATCAAGGACACGCCCTACGGCCAGTTGACCCTGGCCCTGGTCGGCGGTGACCTGGAAGCCGCC
ATGAGCCAGTTGAACGCCGCTGACGTACATGTGGAGGTACTGCGCTGA

Protein sequence :
MIEFHDVHKTYRVAGREIPALQPTRLNIQAGQIFGLIGHSGAGKSTLLRLINRLEEPSGGRILVEGEDVTALDAEGLRRF
RQRVGMIFQHFNLLSSKTVADNIAMPLRLAGGFSRAEVDARVSELLARVGLSDHARKYPAQLSGGQKQRVGIARALACRP
SILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDGGAIVEQGDVADVFLHPQHPTTRR
FVFEAERVDEDERHDDFAHVPGLILRLTFRGEATYAPLLGTVARQTGVDYSILSGRIDRIKDTPYGQLTLALVGGDLEAA
MSQLNAADVHVEVLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 1e-60 53
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 7e-61 53
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-33 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-34 42