Gene Information

Name : aldH (NCGM2_6076)
Accession : YP_005984271.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : putative aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6473845 - 6475338 bp
Length : 1494 bp
Strand : -
Note : similar to GI:116053459; similar to PA14_70140 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGACCACCCTGACCCGCGCCGACTGGGAAGCCCGCGCCAAAGACCTGAAGATCGAAGGCCGCGCCTTCGTCAACGGCGA
ATACAGCAACGCCGCCTCCGGCGAGACCTTCGATTGCCTGAGCCCGGTGGATGGCCGCTTCCTGGCCAAGGTCGCCAGTT
GCGACCTGGCCGATGCCGAGCAGGCGGTCAAGGTCGCTCGCAATGCCTTCGATTCCGGCGCCTGGTCGCGCCTGTCGCCG
GCCAAGCGCAAGCAGACGATGATCCGCTTCGCCGATCTGCTGCTGGAGAACGCCGAGGAGCTGGCCCTGCTGGAAACCCT
GGACATGGGCAAGCCGATCAGCGACTCGCTGCACATCGATGTCGCCAGCGCCGCCAACAGCCTGCGCTGGAGCGCCGAGG
CGATCGACAAGATCTATGACGAAGTCGCCGCCACTCCCCATGCCGAGCTGGGCCTGGTGACCCGCGAGCCGGTCGGCGTG
GTCGCCGCCATCGTGCCGTGGAACTTCCCGCTGCTGATGTCCTGCTGGAAACTCGGTCCGGCCCTGGCCACCGGCAACTC
GGTGATCCTCAAGCCCTCCGAGAAGTCGCCGCTGACCGCCATCCGCATCGCCCAGCTGGCCGTCGAGGCCGGCATTCCGA
AAGGCGTGTTCAACGTGCTGCCGGGCTACGGCCATACGGTAGGCAAGGCGCTGGCACTGCACATGGATGTCGACACCCTG
GTGTTCACCGGTTCGACCAAGATCGCCAAGCAACTGATGGTCTATGCCGGCGAGTCGAACATGAAACGCGTCTGGCTGGA
GGCCGGCGGCAAGAGCCCGAACATCGTCTTCGCCGACGCCCCGGACCTGAAGGCCGCCGCCGAAGCCGCTGCCGGCGCCA
TCGCCTTCAACCAGGGCGAAGTCTGCACCGCCGGTTCGCGCCTGCTGGTGGAGCGCTCCATCAAGGACAAGTTCCTGCCC
CTGGTGATCGAGGCCCTCAAGGGCTGGAAGCCGGGCAACCCGCTGGATCCGGAAACCAACGTCGGCGCGCTGGTGGACAC
CCAGCAGATGAACACCGTGCTGTCCTACATCGAGGCCGGTCACAACGACGGTGCCAAGCTGGTTGCCGGCGGCAAGCGGA
CCCTGGAAGAAACCGGCGGCACCTACGTCGAGCCGACCATCTTCGACGGCGTGACCAATGCGATGAAGATCGCCCGTGAG
GAAATCTTCGGCCCGGTGCTCTCGGTGATCGAGTTCGAGGATGCCGAGGAGGCCGTGCGCATCGCCAACGACACGCCCTA
TGGGCTGGCGGCGGCGGTCTGGACCAGCAACCTGTCCAAGGCGCACCTGACTGCCAAGGCCCTGCGCGCCGGCAGCGTCT
GGGTCAACCAGTACGACGGCGGCGACATGACCGCTCCGTTCGGCGGCTTCAAGCAGTCGGGCAACGGTCGCGACAAGTCG
CTGCACGCCTTCGACAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTCTGA

Protein sequence :
MTTLTRADWEARAKDLKIEGRAFVNGEYSNAASGETFDCLSPVDGRFLAKVASCDLADAEQAVKVARNAFDSGAWSRLSP
AKRKQTMIRFADLLLENAEELALLETLDMGKPISDSLHIDVASAANSLRWSAEAIDKIYDEVAATPHAELGLVTREPVGV
VAAIVPWNFPLLMSCWKLGPALATGNSVILKPSEKSPLTAIRIAQLAVEAGIPKGVFNVLPGYGHTVGKALALHMDVDTL
VFTGSTKIAKQLMVYAGESNMKRVWLEAGGKSPNIVFADAPDLKAAAEAAAGAIAFNQGEVCTAGSRLLVERSIKDKFLP
LVIEALKGWKPGNPLDPETNVGALVDTQQMNTVLSYIEAGHNDGAKLVAGGKRTLEETGGTYVEPTIFDGVTNAMKIARE
EIFGPVLSVIEFEDAEEAVRIANDTPYGLAAAVWTSNLSKAHLTAKALRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHAFDKYTELKATWIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-124 59
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-71 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-72 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-72 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-72 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldH YP_005984271.1 putative aldehyde dehydrogenase VFG0082 Protein 8e-72 41