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Name : dnaB (NCGM2_0591) Accession : YP_005978864.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 660662 - 662056 bp Length : 1395 bp Strand : + Note : similar to GI:116053080; similar to PA14_65130 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGAACGAGATCACCAGCCCCGAGCAATACGACCTGGAAACCACAGCCCTGAAGGTGCCGCCGCACTCGATCGAGGCCGA GCAGGCCGTGCTGGGTGGCCTGATGCTGGACAACAACGCCTGGGAGCGGGTGTCGGACTCGGTGTCCGACGGCGATTTCT ACCGCCATGACCATCGCCTGATCTTCCGCGCCATCTACAAGCTGGCCGAGGCCAACCAGCCGATCGACGTGGTGACCCTC TCCGAGCAGTTGGAGAAGGAAGGACAACTGGCCCAGGTCGGCGGCCTGGCCTATCTCGGCGAACTGGCGAAGAACATTCC GTCGGTCGCCAACATCAAGGCCTACGCGCAGATCATCCGCGAGCGCGCCACCCTGCGCCAACTGATCGGCATCAGCAACG AGATCGCCGACAGCGCCTTCCACCCGGAAGGGCGCGGCGCCAACGAGATCCTCGACGAGGCCGAGCGGAAGATCTTCGAG ATCGCCGAAGCGCGACCGAAGACCGGCGGGCCGGTGGGGATCAGCGATATCCTGGTCAAGACCATCGACCGCATCGACTA CCTGTTCAACACCAGCGAGGCGCTGACCGGGGTGTCCACCGGTTTCACCGACCTCGACGAGAAGACCAGCGGCCTGCAGC CGGCCGACCTGATCATCGTCGCCGGGCGTCCGTCGATGGGTAAGACCACCTTCGCCATGAACCTGGTCGAGAATGCGGTG ATGCGCACCGACAAGGCCGTGTTGGTGTACTCCCTGGAGATGCCCTCCGACTCGATCGTGATGCGTATGCTCTCGTCGCT CGGTCGCATCGATCAGACCAAGGTCCGTTCCGGCAAGCTCGACGACGAGGATTGGCCGCGCCTGACCTCGGCGATCAACC TGCTCAACGACAAGAAGCTGTTCATCGACGACACCGCCGGCATCAGCCCCTCGGAAATGCGTGCGCGGACCCGTCGCCTG GTGCGCGAGCACGGCGACCTGGCGCTGATCATGATCGACTACCTGCAGCTGATGCAGATACCCGGCTCCAGCGGCGACAA CCGGACCAACGAGATTTCCGAGATCTCCCGCTCGCTGAAGGCCCTGGCGAAGGAATTCAACTGCCCGGTGATCGCCCTGT CGCAGCTCAACCGCTCCCTGGAGCAGCGACCCAACAAGCGCCCGGTGAACTCCGACTTGCGCGAATCCGGGGCGATCGAG CAGGACGCCGACGTGATCATGTTCGTCTACCGCGACGAGGTGTACCACCCGGAGACCGAGTTCAAGGGCGTCGCCGAAAT CATCATCGGCAAGCAGCGTAACGGTCCGATCGGCACGGTGCGCCTGGCCTTCATCGGCAAATACACGCGCTTCGAGAACC TTGCCGCCGGCATGTACAACTTCGAGGACGAATGA Protein sequence : MNEITSPEQYDLETTALKVPPHSIEAEQAVLGGLMLDNNAWERVSDSVSDGDFYRHDHRLIFRAIYKLAEANQPIDVVTL SEQLEKEGQLAQVGGLAYLGELAKNIPSVANIKAYAQIIRERATLRQLIGISNEIADSAFHPEGRGANEILDEAERKIFE IAEARPKTGGPVGISDILVKTIDRIDYLFNTSEALTGVSTGFTDLDEKTSGLQPADLIIVAGRPSMGKTTFAMNLVENAV MRTDKAVLVYSLEMPSDSIVMRMLSSLGRIDQTKVRSGKLDDEDWPRLTSAINLLNDKKLFIDDTAGISPSEMRARTRRL VREHGDLALIMIDYLQLMQIPGSSGDNRTNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIE QDADVIMFVYRDEVYHPETEFKGVAEIIIGKQRNGPIGTVRLAFIGKYTRFENLAAGMYNFEDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 5e-122 | 58 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-106 | 55 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-106 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 6e-106 | 51 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 6e-106 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-98 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-95 | 47 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-95 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 5e-83 | 44 |
