Gene Information

Name : katA (NCGM2_5481)
Accession : YP_005983687.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5878479 - 5879927 bp
Length : 1449 bp
Strand : -
Note : similar to GI:116052272; similar to PA14_09150 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGGAAGAGAAGACCCGCCTGACCACTGCCGCTGGCGCACCGGTGGTCGATAACCAGAACGTGCAGACCGCCGGTCCGCG
TGGCCCGATGTTGCTGCAGGACGTGTGGTTCCTCGAGAAGCTCGCCCACTTCGATCGCGAAGTGATCCCCGAGCGACGCA
TGCATGCGAAAGGCTCCGCGGCCTACGGCACCTTCACCGTCACCCATGACATCACCCCCTACACCCGGGCGAAGATCTTC
TCCCAGGTCGGCAAGAAGACCGATATGTTCCTGCGCTTCTCCACCGTCGCCGGTGAGCGTGGCGCGGCGGATGCCGAGCG
AGACATCCGCGGCTTCTCCATGCGTTTCTACACCGAGCAGGGCAACTGGGACCTGGTCGGCAACAACACCCCGGTGTTCT
ATCTGCGCGACCCGCTCAAGTTCCCCGATCTCAACCACGTGGTGAAGCGTGACCCGCGCACCAACCTGCGCAATGCGACC
TTCAAGTGGGACTTTTTCTCTCACCTCCCCGAGTCGCTGCATCAGTTGACCATCGACTTCAGCGACCGCGGCCTGCCGAA
GAGCTATCGGCACATCCATGGTTTCGGCAGCCATACCTTCAGCTTCATCAATGCGAACAACGAGCGCTTCTGGGTCAAGT
TCCACTTCAAGACCCAACAGGGCATCGAGAACCTGACCAACGCCGAGGCCGCCGAAGTGATCGCCCAGGACCGTGAGAGT
TCGCAGCGCGACTTGTACGAGAGCATCGAGAAAGGCGACTTCCCGCGCTGGAAGATGTACGTGCAGATCATGCCCGAGAA
GGAAGCGGCCACCTATCGCTACAACCCGTTCGACCTGACCAAGGTCTGGCCCCACGGTGACTACCCGTTGATCGAAGTGG
GCTTCTTCGAGCTGAACCGTAACCCGGACAACTACTTCGCCGAGGTCGAGCAGGCCGCTTTCACGCCGGCCAACGTGGTG
CCCGGTATCGGTTTCTCGCCGGACAAGATGCTCCAGGGCCGTCTATTCTCCTACGGCGACGCCCATCGCTATCGCCTGGG
CGTCAACCACCACCAGATCCCGGTGAACGCCGCGCGTTGCCCGCACCAGGTCTACCACCGCGATGGCGGCATGCGGGTGG
ACGGCAACAACGCCCATCAGCGCGTCACCTACGAGCCGAACAGCTTCAACCAGTGGCAGGAGCAGCCTGACTTCTCCGAG
CCGCCGCTGAGCCTGGAGGGCGCGGCGGACCACTGGAACCACCGGGTGGACGACGACTACTACAGCCAGCCCGCCGCGCT
GTTCCATCTGTTCACCGACGAGCAGAAGCAGCGGCTGTTCGCCAACATCGCCGAAGACATCCGCGATGTACCGGAACAGA
TCCAGCGTCGCCAGATCGGCCTGTTCCTCAAGGTCGATCCGGCCTACGGCAAAGGCGTCGCCGACGCCCTCGGCCTGAAG
CTGGACTGA

Protein sequence :
MEEKTRLTTAAGAPVVDNQNVQTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSAAYGTFTVTHDITPYTRAKIF
SQVGKKTDMFLRFSTVAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNAT
FKWDFFSHLPESLHQLTIDFSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHFKTQQGIENLTNAEAAEVIAQDRES
SQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNPFDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVV
PGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSE
PPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRDVPEQIQRRQIGLFLKVDPAYGKGVADALGLK
LD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 0.0 97
katA YP_005126717.1 catalase Not tested Not named Protein 4e-96 46
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 5e-93 44
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 5e-93 44
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 5e-93 44
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 5e-93 44