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Name : pchD (NCGM2_5473) Accession : YP_005983679.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Virulence Product : pyochelin biosynthesis protein Function : - COG functional category : - COG ID : - EC number : - Position : 5868643 - 5870286 bp Length : 1644 bp Strand : + Note : similar to GI:116052265; similar to PA14_09240 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGACTTCCTCGCCCGTCACCCCATCGGCCGTCGACGACGCCCCCGACTGGCCCGCCGCCTTCGTCCGCCGCTATCTCGA CGCCGGCCACTGGCAGGACCAAAGCTTCGCCGAAGCCCTGGCCGCCAGCGCCGCGCGCCATCCGCGGCGGATCGCGCTCT GCGACGACGACCAGCGGCTCAGCTATGCCGACCTGCTCCAGCGCTGCCGCCGCCTGGCAGCCGGACTGCGCCAGGCCGGC CTCGCACATGGCGACACGGTAGTGCTGCACCTGCCCAACGGCATCGCCTTCGTCGAGACCTGCTTCGCCCTGTTCCAGCT CGGCGTACGCCCGGTGCTCGCCCTCCCCGCCCATCGCCAGCATGAGATCAGCGGTTTCTGCCGCTTCGCCGAGGCCAAGG CCTACATCGGCGCCGAACGGATCGACGGCTTCGACCCACGGCCGATGGCCCGTGAGCTGCTCGCCAGCGGCGCCTGCCGG ATGGCGCTGATCCACGGCGAGGCCGAGGCGCCGCTGCAAGCGCTGGCACCGCTGTACCAGGCCGACGCGCTGGAAGACTG CGCCGCCCGCGCCGAGGATATCGCCTGCTTCCAGTTGTCCGGCGGCACCACCGGCACGCCGAAGCTGATTCCCCGGCGTC ATCGCGAGTATCTCTACAACGTCCGCGCCAGCGCCGAGGTCTGCGGCTTCGACGAGCACACGGTGTACCTCACCGGGTTG CCGATGGCGCACAACTTCACCCTCTGCTGCCCCGGAGTGATCGGCACGCTGCTGGCCGGCGGCCGCGTGGTGGTCAGCCA GCGCGCCGATCCCGAGCATTGCTTCGCCCTGATCGCCCGTGAACGGGTCACCCACACCGCCCTGGTACCGCCGCTGGCGA TGCTCTGGCTGGATGCCCAGGAAAGCCGCCGCGCCGATCTATCCAGCCTGCTTCTGCTCCAGGTCGGCGGCTCCAGGCTC GGCAGCAGTGCCGCGCAACGCGTCGAACCGGTGCTCGGCTGCCAGTTGCAACAGGTGCTGGGAATGGCCGAGGGGCTGAT CTGCTACACCCGCCTGGACGATCCGCCCGAACGCGTGCTGCATACCCAGGGCCGGCCGCTGTCGCCGGACGACGAAGTGC GGGTGGTCGACGCCGAGGGCCGCGAGGTCGGCCCCGGCGAGGTCGGCGAACTGACCGTGCGCGGTCCCTACACCATCCGC GGCTACTACCGCCTGCCCGAACACAACGCCAAGGCCTTCAGCGCGGACGGCTTCTACCGCACCGGCGACCGGGTCAGCCG CGACAAGGACGGCTACCTGGTGGTGGAGGGCCGCGACAAGGACCAGATCAACCGCGGCGGCGAGAAGATCGCCGCAGAAG AGGTGGAGAACCTGCTGATCGCCCATCCGCAGGTGCACGACGCCACCGTCGTGGCGATGCCCGACAGCCTGCTCGGCGAG CGCACCTGCGCCTTCGTCATCCCGCGCCAGCCGGCGCCCTCGGCGCTGAAGCTGAAGCAATACCTGCACGCCTGCGGGCT GGCCGCGTTCAAGGTGCCGGACCGCATCGAGCTGGTCCCGGCCTTCCCCCAGACCGGCATCGGCAAGATCAGCAAGAAGG ACCTGCGCGAGCGCCTGCGCCGCGAGCTGGAGGCCCGCGCATGA Protein sequence : MTSSPVTPSAVDDAPDWPAAFVRRYLDAGHWQDQSFAEALAASAARHPRRIALCDDDQRLSYADLLQRCRRLAAGLRQAG LAHGDTVVLHLPNGIAFVETCFALFQLGVRPVLALPAHRQHEISGFCRFAEAKAYIGAERIDGFDPRPMARELLASGACR MALIHGEAEAPLQALAPLYQADALEDCAARAEDIACFQLSGGTTGTPKLIPRRHREYLYNVRASAEVCGFDEHTVYLTGL PMAHNFTLCCPGVIGTLLAGGRVVVSQRADPEHCFALIARERVTHTALVPPLAMLWLDAQESRRADLSSLLLLQVGGSRL GSSAAQRVEPVLGCQLQQVLGMAEGLICYTRLDDPPERVLHTQGRPLSPDDEVRVVDAEGREVGPGEVGELTVRGPYTIR GYYRLPEHNAKAFSADGFYRTGDRVSRDKDGYLVVEGRDKDQINRGGEKIAAEEVENLLIAHPQVHDATVVAMPDSLLGE RTCAFVIPRQPAPSALKLKQYLHACGLAAFKVPDRIELVPAFPQTGIGKISKKDLRERLRRELEARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtE | YP_070120.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 9e-94 | 51 |
| ybtE | CAA21394.1 | - | Virulence | HPI | Protein | 9e-94 | 51 |
| irp5 | CAA73130.1 | Irp5 protein | Virulence | HPI | Protein | 1e-93 | 51 |
| ybtE | AAA93464.1 | yersiniabactin 2,3-dihydoxybenzoate-AMP ligase | Virulence | HPI | Protein | 7e-94 | 51 |
| irp5 | YP_001006819.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 2e-93 | 51 |
| ybtE | YP_853079.1 | yersiniabactin siderophore biosynthetic protein | Virulence | PAI IV APEC-O1 | Protein | 1e-93 | 51 |
| irp5 | YP_002346898.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 9e-94 | 51 |
| ybtE | NP_669710.1 | salicyl-AMP ligase | Virulence | HPI | Protein | 9e-94 | 51 |
| ybtE | NP_993003.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 9e-94 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pchD | YP_005983679.1 | pyochelin biosynthesis protein | VFG0168 | Protein | 0.0 | 99 |
| pchD | YP_005983679.1 | pyochelin biosynthesis protein | VFG1817 | Protein | 2e-76 | 46 |
| pchD | YP_005983679.1 | pyochelin biosynthesis protein | VFG0932 | Protein | 1e-93 | 45 |
