Gene Information

Name : fepC (NCGM2_5361)
Accession : YP_005983567.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5748297 - 5749094 bp
Length : 798 bp
Strand : -
Note : similar to GI:116052194; similar to PA14_10180 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGACCCATCGCCTGCACGCGGACGCCGTGACCTTGCGCCGCGACGCGCGGACCGTTTCGCGGAATCTCTCGCTGGCCAT
CCCCGAGGGTTCGTTCAGTGTGATCGTCGGGCCCAACGCCTGCGGCAAGTCGACCCTGCTGGCGGCATTGTCGCGCCTGT
TGGCGCCGGCCGAGGGCCGGGTGGTGCTGGACGGCAGGGATATCCACAGCCTGCCGGGACGGGAAGTGGCGCGGCGTCTC
GGCCTGCTGCCGCAGAGCGCGCTGGCGCCGGATGGCATCACGGTGGCCGAGCTGGTGGCGCGCGGGCGCTATCCGCACCA
GTCGTTCCTGCGCCAGTGGTCGCCGGCGGATGAGCGCGCGGTAGCGGCGGCGTTACGCGCCACGCGGGTCGACGGCCTGG
CCGAGCGACCGCTCGACGCGCTCTCCGGCGGCCAGCGGCAACGCGTGTGGATCGCCATGGTGCTGGCGCAGGAAACCCCG
TTGCTGCTGCTCGACGAGCCAACCACCTACCTGGATATCGTCCACCAGATCGAATTGCTCGAACTGCTCGCCGAGCTGAA
TCGCCAGGGGCGCACCATCGTCGCCGTGCTGCACGACCTCAACCAGGCCTGCCGCTATGCCTCGCACCTGATCGCCATGC
GTGACGGCGCGATCCTCGCCGAGGGCGCGCCGGCGCATATCTTCACCGAGCGTCTGGTGGAGGAGGTGTTCGGCTTGCGC
TCGTTGATCATCGCCGACCCGGTCAGCGGCACGCCGCTGCTGGTGCCGCGCGGGATCGCCGCCGACGCGCCGGGCTGA

Protein sequence :
MTHRLHADAVTLRRDARTVSRNLSLAIPEGSFSVIVGPNACGKSTLLAALSRLLAPAEGRVVLDGRDIHSLPGREVARRL
GLLPQSALAPDGITVAELVARGRYPHQSFLRQWSPADERAVAAALRATRVDGLAERPLDALSGGQRQRVWIAMVLAQETP
LLLLDEPTTYLDIVHQIELLELLAELNRQGRTIVAVLHDLNQACRYASHLIAMRDGAILAEGAPAHIFTERLVEEVFGLR
SLIIADPVSGTPLLVPRGIAADAPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-48 55
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-49 53
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-49 53
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-49 53
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-49 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-38 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-43 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-43 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-38 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-37 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-37 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-37 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_005983567.1 ferric enterobactin transport protein BAC0164 Protein 8e-39 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_005983567.1 ferric enterobactin transport protein VFG0925 Protein 1e-57 61
fepC YP_005983567.1 ferric enterobactin transport protein VFG1042 Protein 8e-39 49