Gene Information

Name : NCGM2_5278 (NCGM2_5278)
Accession : YP_005983484.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5651129 - 5651335 bp
Length : 207 bp
Strand : +
Note : similar to GI:116052113; similar to PA14_11150 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGAGGAACCGGGTTCGCGAGTTGCGCGCGGAGCGCGGTTGGTCACAGGCGGAGCTGGCCGGAAAGCTGGAGGTATCGCG
GCAGACGGTGAACGCCATCGAAACCGGCCGCTACGATCCAAGCCTGCCCTTGGCCTTCAAGCTCGCCCGGGTGTTCGGAC
TGGCGATAGAAGCGATCTTCGACGACCGGGAAGGCCAGCTGGACTGA

Protein sequence :
MRNRVRELRAERGWSQAELAGKLEVSRQTVNAIETGRYDPSLPLAFKLARVFGLAIEAIFDDREGQLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-12 51
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-06 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 8e-07 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NCGM2_5278 YP_005983484.1 putative transcriptional regulator VFG2175 Protein 3e-07 48
NCGM2_5278 YP_005983484.1 putative transcriptional regulator VFG2168 Protein 3e-07 48