Gene Information

Name : styD (NCGM2_5274)
Accession : YP_005983480.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : putative aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5647434 - 5648921 bp
Length : 1488 bp
Strand : -
Note : similar to GI:116052109; similar to PA14_11190 of P. aeruginosa UCBPP-PA14

DNA sequence : 
ATGAGTATTGCCATCGACCCGTCCGTCAGCGCCTTCTTGCGCAGCCCCCATGGCCTGCTGATCGACGGCGAGTCCGGGCC
GGCGCGTTCCGGCGCCGACATGCCGCTGTACGACCCGGCGACCGGTGCCGAGCTGGCGCGCGTGGCCCGCGCCGGCGCCG
AAGACGTCGATCGGGCGGTCGCCGCCGCGCGGCGTGCGTTCGAAGGCAACTGGGCAGGCCAGCGCCCGGCCGATCGCGAG
CGCCTGCTGCTGCGACTGGCGGAACGGATCGAGGCGCATGGCGAGCAACTGGCGCAGCTGGAGACCCTGAACAACGGCAA
GTCGATCAACCTGTCGCGGGCCCTGGAGGTCGGCGCCTCGGTCGAGTTCATCCGCTACATGGCCGGCTGGGCGACCAAGA
TCGAGGGCCGCAGCCTCGACCTGTCGATCGCTGCGGTCCCAGGCGCGCGCTACCGGGCCTACACGGTGCCGGAGCCGGTG
GGCGTGGTTGGAGCCATCGTGCCGTGGAATTTCCCCTTGCTGATGGCGATCTGGAAGATCGTCCCGGCCCTGGCCTGCGG
CTGCACCGTAGTCCTCAAACCGGCCGACGAAACCCCGCTGACCGCCCTGCGCCTCGGCCAGTTGTGCCTGGAGGCGGGGA
TTCCACCAGGGGTGGTGAACATCGTCACCGGCACGGGCGCCGAGGCCGGCGCGGCACTGGCGACGCACCCGGGCATCGAC
AAGCTGGCGTTCACCGGCTCGACCCCGGTGGGCAAGCTGATCGGGCATGCGGCGGTGGAGAACATGACGCGTTTTTCCCT
CGAACTCGGCGGCAAATCCCCGGTGATCATCCTCGATGACACCAGCCTGGACATGGCTGCCGCCGGTTCCGCCGGCGCGA
TCTTCTTCAACCAGGGGCAGGTCTGCACCGCTGGTTCGCGCCTCTATGTGCAGCGCAAGCGTTTCGACCAGGTGCTGGAG
CGCCTGGCGGCCATCGCCGGCGACCTGAGCATCGGCCCCGGCCTGGATCCGACCACGCAGATCAACCCGCTGGTCTCGGC
CAGGCAGCAGGAGCGGGTGCTGGGGATGATCGAAAGCGGGGTGGCCGAGGGCGCCAGCGTGGTCTGCGGCGGGGCGCGCC
AGGGCGAGATGGGGTTCTACGTGCAGCCGACGATCCTTGCCGACGTCACCCCGGGGATGCAGGTGGTGCGCGAGGAAATC
TTCGGGCCGGTGCTGGTGGCGACGCCCTTCGACGATCTCGACGAAGCGGTGCGTCTGGCCAACGACAGCATCTACGGGCT
CGGTGCGAGCATCTGGTCCAACGACCTGCGCCAGGTCATGGACCTGGTGCCCAGGATCAAGGCCGGCACGGTATGGGTGA
ACGCCCACAACCTGCTCGACCCGTCGATGCCGTTCGGCGGCTTCAAGCAGTCCGGCATCGGTCGCGAGATGGGCCATGCG
GCGATCGAGGCGTACACCGAGAACAAGTCGGTGTGCATCGCCTACTGA

Protein sequence : 
MSIAIDPSVSAFLRSPHGLLIDGESGPARSGADMPLYDPATGAELARVARAGAEDVDRAVAAARRAFEGNWAGQRPADRE
RLLLRLAERIEAHGEQLAQLETLNNGKSINLSRALEVGASVEFIRYMAGWATKIEGRSLDLSIAAVPGARYRAYTVPEPV
GVVGAIVPWNFPLLMAIWKIVPALACGCTVVLKPADETPLTALRLGQLCLEAGIPPGVVNIVTGTGAEAGAALATHPGID
KLAFTGSTPVGKLIGHAAVENMTRFSLELGGKSPVIILDDTSLDMAAAGSAGAIFFNQGQVCTAGSRLYVQRKRFDQVLE
RLAAIAGDLSIGPGLDPTTQINPLVSARQQERVLGMIESGVAEGASVVCGGARQGEMGFYVQPTILADVTPGMQVVREEI
FGPVLVATPFDDLDEAVRLANDSIYGLGASIWSNDLRQVMDLVPRIKAGTVWVNAHNLLDPSMPFGGFKQSGIGREMGHA
AIEAYTENKSVCIAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-71 48
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-61 46
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-63 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-63 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-63 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-63 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-63 43
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 4e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
styD YP_005983480.1 putative aldehyde dehydrogenase VFG0082 Protein 1e-63 43