Gene Information

Name : xerD (NCGM2_4871)
Accession : YP_005983079.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5254895 - 5255791 bp
Length : 897 bp
Strand : -
Note : similar to GI:116051736; similar to PA14_16040 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGAGTACCCTCGAACATCCCCTGATCGACCGTTTCCTCGATGCCCTGTGGCTGGAAAAAGGCCTTGCCGACAACACCCG
CGAGGCTTATCGCAACGACCTCCAGCAGTTCAACGCCTGGCTCGATGGCCGCGGGTTGCGCCTGGAGGGCATCGGCCGCG
ACGCCATCCTCGATCACCTGGCCTGGCGCCTGGAACAGGGCTACAAGGCCCGCTCGACCGCGCGCTTCCTCTCCGGCCTG
CGTGGCTTCTATCGCTATTGTCTGCGCGACGGCCTGATCGCCGAGGATCCCACCTTGCAGGTGGACCTGCCGCAACTGGG
CAAGCCGTTGCCGAAATCCCTCTCCGAAGCGGACGTCGAGGCATTGCTGGCGGCGCCGGAAGTCGACGACCCGCTGGGCC
TGCGCGATCGCACCATGCTCGAAGTGCTGTATGCCTGCGGCCTGCGGGTCAGCGAACTGGTCGGCCTGACCCTGGAGCAG
GTCAACCTGCGCCAGGGCGTGGTCAAGGTGTTCGGCAAGGGCAGCAAGGAGCGCCTGGTGCCGCTCGGCGAGGAAGCCAT
CGGCTGGCTCGAACGCTACCTGCGCGAGGCGCGCGGCGACCTGCTCGGCGGGCGACCCAGCGACGTGCTGTTCCCCAGCC
TGCGCGGCGAACAGATGACCCGCCAGACCTTCTGGCATCGCATCAAGCATCACGCGCAGGTGGCGGCGATCGGCACGTCG
ATTTCGCCGCACACCCTGCGTCACGCCTTCGCCACCCACCTGCTCAACCATGGCGCCGACCTGCGGGTGGTGCAGATGCT
GCTCGGCCACAGCGACCTGTCGACCACCCAGATCTATACCCATATCGCCCGGGCCCGCCTCCAGGATCTGCACGCACGCC
ACCACCCGCGAGGCTGA

Protein sequence :
MSTLEHPLIDRFLDALWLEKGLADNTREAYRNDLQQFNAWLDGRGLRLEGIGRDAILDHLAWRLEQGYKARSTARFLSGL
RGFYRYCLRDGLIAEDPTLQVDLPQLGKPLPKSLSEADVEALLAAPEVDDPLGLRDRTMLEVLYACGLRVSELVGLTLEQ
VNLRQGVVKVFGKGSKERLVPLGEEAIGWLERYLREARGDLLGGRPSDVLFPSLRGEQMTRQTFWHRIKHHAQVAAIGTS
ISPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQDLHARHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-65 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-65 54