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Name : wbpM (NCGM2_4269) Accession : YP_005982480.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Virulence Product : nucleotide sugar epimerase/dehydratase Function : - COG functional category : - COG ID : - EC number : - Position : 4604041 - 4605903 bp Length : 1863 bp Strand : - Note : similar to GI:116051137; similar to PA14_23470 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGATCGACGTGTTCGGCGAGCATGCATGGCTTTTCATCACTGCGCCGGTCATCGCCATTCCACTATTCATTCGCTTCGG CATGTATCGCGCGGTGATGCGCTATCTCGGTAACGACGCATTGATCGCCATCGCCAAGGCGGTGACCATCTCGGCTCTGG TGCTGTCGCTGGTGGTGTACTGGTATCGTGGCGCGCCGGCGCCGGTGCCGCGTTCCCTGGTGTTCAACTACTGGTGGTTG AGCATGCTGCTGATCGGCGGCTTGCGTCTGGCCATGCGCCAGTATTTCATGGGCGACTGGTACTCTGCTGTGCAGTCGGT ACCATTTCTCAATCGCCAGGATGGCCTGCCCAGGGTGGCTATCTATGGCGCGGGGGCGGCCGGCAACCAGTTGGTTGCGG CGTTGCGTCTCGGTCGGGCGATGCGTCCGGTGGCGTTCATCGATGACGACAAGCAGATCGCCAACCGGGTCATTGCCGGT CTGCGGGTCTATACCGCCAAGCATATCCGCCAGATGATCGACGAGACGGGCGCGCAGGAGGTTCTCCTGGCGATTCCTTC CGCCACTCGGGCCCGGCGCCGAGAGATTCTCGAGTCCCTGGAGCCGTTCCCGCTGCACGTGCGCAGCATGCCCGGCTTCA TGGACCTGGCCAGCGGCCGGGTCAAGGTGGACGACCTGCAGGAGGTGGACATCGCTGACCTGCTGGGGCGCGACAGCGTC GCACCGCGCAAGGAGCTGCTGGAACGGTGCATCCGCGGTCAGGTGGTGATGGTGACCGGGGCGGGCGGCTCTATCGGTTC GGAACTCTGTCGGCAGATCATGAGTTGTTCGCCTAGCGTGCTGATCCTGTTCGAGCACAGCGAATACAACCTCTATAGCA TCCATCAGGAACTGGAGCGTCGGATCAAGCGCGAGTCGCTTTCGGTGAACCTGTTGCCGATCCTCGGTTCGGTGCGCAAT CCCGAGCGCCTGGTGGACGTGATGCGTACCTGGAAGGTCAACACCGTCTACCATGCGGCGGCCTACAAGCATGTGCCGAT CGTCGAGCACAACATCGCCGAAGGCGTTCTCAACAACGTGATAGGCACCTTGCATGCGGTGCAGGCCGCGGTGCAGGTCG GCGTGCAGAACTTCGTGCTGATTTCCACCGACAAGGCGGTGCGGCCGACCAATGTGATGGGCAGCACCAAGCGCCTGGCG GAGATGGTCCTTCAGGCGCTCAGCAACGAATCGGCGCCGGTGCTGTTCGGCGACCGGAAGGACGTGCATCACGTCAACAA GACCCGTTTCACCATGGTCCGCTTCGGCAACGTCCTCGGTTCGTCCGGCTCGGTCATTCCGCTGTTCCGCGAGCAGATCA AGCGCGGCGGCCCGGTGACGGTCACCCACCCGAGCATCACCCGTTACTTCATGACCATTCCCGAGGCGGCGCAGTTGGTC ATCCAGGCCGGTTCGATGGGGCAGGGCGGAGATGTATTCGTGCTGGACATGGGGCCGCCGGTGAAGATCCTGGAGCTCGC CGAGAAGATGATCCACCTGTCCGGCCTGAGCGTGCGTTCCGAGCGTTCGCCCCATGGTGACATCGCCATCGAGTTCAGTG GCCTGCGTCCTGGCGAGAAGCTCTACGAAGAGCTGCTGATCGGTGACAACGTGAATCCCACCGACCATCCGATGATCATG CGGGCCAACGAGGAACACCTGAGCTGGGAGGCCTTCAAGGTCGTGCTGGAGCAGTTGCTGGCCGCCGTGGAGAAGGACGA CTACTCGCGGGTTCGCCAGTTGCTGCGGGAAACCGTCAGCGGCTATGCGCCTGACGGTGAAATCGTCGACTGGATCTATC GCCAGAGGCGGCGAGAACCCTGA Protein sequence : MIDVFGEHAWLFITAPVIAIPLFIRFGMYRAVMRYLGNDALIAIAKAVTISALVLSLVVYWYRGAPAPVPRSLVFNYWWL SMLLIGGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVAIYGAGAAGNQLVAALRLGRAMRPVAFIDDDKQIANRVIAG LRVYTAKHIRQMIDETGAQEVLLAIPSATRARRREILESLEPFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSV APRKELLERCIRGQVVMVTGAGGSIGSELCRQIMSCSPSVLILFEHSEYNLYSIHQELERRIKRESLSVNLLPILGSVRN PERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGVLNNVIGTLHAVQAAVQVGVQNFVLISTDKAVRPTNVMGSTKRLA EMVLQALSNESAPVLFGDRKDVHHVNKTRFTMVRFGNVLGSSGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLV IQAGSMGQGGDVFVLDMGPPVKILELAEKMIHLSGLSVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTDHPMIM RANEEHLSWEAFKVVLEQLLAAVEKDDYSRVRQLLRETVSGYAPDGEIVDWIYRQRRREP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-85 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpM | YP_005982480.1 | nucleotide sugar epimerase/dehydratase | VFG0029 | Protein | 2e-117 | 48 |
