Gene Information

Name : xcpT (NCGM2_4224)
Accession : YP_005982440.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4559602 - 4560030 bp
Length : 429 bp
Strand : -
Note : similar to GI:116051097; similar to PA14_24020 of P. aeruginosa UCBPP-PA14

DNA sequence :
TTGCAGCGTCGCCAACAGTCGGGCTTCACCCTGATCGAAATCATGGTCGTGGTGGTCATCCTCGGCATCCTCGCCGCCCT
GGTGGTGCCGCAGGTGATGAGCCGTCCCGACCAGGCCAAGGTCACCGTGGCCAAGGGCGACATCAAGGCCATCGCTGCCG
CGCTGGACATGTACAAGCTGGACAACTTCGCCTATCCGAGCACCCAGCAGGGCCTCGAGGCGCTGGTGAAGAAGCCCACC
GGCAACCCGCAGCCGAAGAACTGGAACAAGGACGGCTACCTGAAGAAGCTGCCGGTCGATCCGTGGGGCAATCCCTACCA
GTACCTGGCGCCGGGCACCAAGGGCCCGTTCGACCTGTATTCGCTGGGCGCCGACGGCAAGGAAGGCGGCAGCGACAACG
ACGCCGAAATCGGCAACTGGGACAACTGA

Protein sequence :
MQRRQQSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAYPSTQQGLEALVKKPT
GNPQPKNWNKDGYLKKLPVDPWGNPYQYLAPGTKGPFDLYSLGADGKEGGSDNDAEIGNWDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-26 54
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-26 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xcpT YP_005982440.1 general secretion pathway protein G VFG0180 Protein 3e-51 99
xcpT YP_005982440.1 general secretion pathway protein G VFG1871 Protein 3e-26 61
xcpT YP_005982440.1 general secretion pathway protein G VFG2050 Protein 7e-27 54