Gene Information

Name : hplT (NCGM2_3692)
Accession : YP_005981921.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : putative type II secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4028088 - 4028522 bp
Length : 435 bp
Strand : -
Note : similar to GI:116050661; similar to PA14_29510 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGAACAGAGCTGCACAACAGGGCTTCACCCTGCTCGAGATGATTGTGGTGTTGGTGATTATCGGCATGCTGATGGGGCT
CGTCGGGCCGCGACTGTTCAGTCAGGCCGACAAGGCGAAGGCGCAGACGGCGGATACCCAGGTGAAGATGCTCAAGGGCG
CGTTGCTCACCATGCGCCTGGACATCGGCCGGCTGCCGACCGAAGAAGAAGGCCTGGCGCTACTCAACACGCCGCCTTCC
GATGAACGTCTCGGGGCCTTCTGGCACGGGCCCTACCTCGAGGGCGGCGTACCGCTGGACCCCTGGAACCGGCCTTACCT
GTACAGCGACAGGCCGAGTGCCGAACAACCCTTCACTCTCTACAGCCAGGGCGCGGATGGGCAGCCCGGTGGGAAAGGCC
TGGATGCCGATGTCGGTTACGCGCCCAAACGTTGA

Protein sequence :
MNRAAQQGFTLLEMIVVLVIIGMLMGLVGPRLFSQADKAKAQTADTQVKMLKGALLTMRLDIGRLPTEEEGLALLNTPPS
DERLGAFWHGPYLEGGVPLDPWNRPYLYSDRPSAEQPFTLYSQGADGQPGGKGLDADVGYAPKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 9e-18 42
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hplT YP_005981921.1 putative type II secretion system protein VFG2050 Protein 3e-18 42
hplT YP_005981921.1 putative type II secretion system protein VFG0180 Protein 8e-20 41