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Name : gabD (NCGM2_0348) Accession : YP_005978625.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : - COG ID : - EC number : - Position : 389438 - 390889 bp Length : 1452 bp Strand : - Note : similar to GI:116053992; similar to PA14_03430 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGCAACTCAAAGATGCCAAGCTGTTCCGTCAACAAGCCTACGTCGATGGCGCCTGGGTGGATGCCGACAACGGCCAGAC CATCAAGGTGAACAACCCGGCCACCGGCGAGATCATCGGCAGCGTGCCGAAGATGGGCGCCGCCGAGACCCGCCGCGCCA TCGAGGCTGCCGACAAGGCCCTGCCGGCCTGGCGCGCGCTGACCGCCAAGGAGCGCGCCAACAAGCTGCGCCGCTGGTTC GACCTGATGATCGAGAACCAGGACGACCTGGCCCGCCTGATGACCATCGAGCAGGGCAAGCCGCTGGCCGAGGCCAAGGG CGAGATCGCCTACGCCGCCTCCTTCCTCGAATGGTTCGGCGAAGAAGCCAAGCGCATCTACGGCGACACCATTCCCGGCC ACCAGCCGGACAAGCGCATCATCGTGATCAAGCAGCCGATCGGTGTGACCGCGGCCATCACGCCGTGGAACTTCCCCTCG GCGATGATCACCCGCAAGGCCGGCCCGGCCCTGGCCGCCGGCTGTACCATGGTGCTCAAGCCTGCTTCGCAGACCCCGTA TTCCGCCCTGGCCCTGGCCGAGCTGGCAGAGCGCGCCGGCATTCCGAAGGGCGTGTTCAGCGTGGTCACCGGTAGCGCCG GCGAAGTCGGCGGCGAGCTGACCAGCAACCCGATCGTGCGCAAGCTGACCTTCACCGGTTCCACCGAAATCGGCCGCCAA CTGATGGCCGAGTGCGCCCAGGACATCAAGAAGGTGTCCCTGGAGCTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGA CGCCGACCTGGACGCCGCCGTCGAGGGCGCGCTGATTTCCAAGTACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACC GCCTGTACGTGCAGGACGGCGTGTACGACGCCTTCGTCGACAAGCTGAAGGCCGCCGTGGCCAAGCTGAACATCGGCAAC GGCCTGGAAGCCGGCGTGACCACCGGTCCGCTGATCGACGCCAAGGCCGTGACCAAGGTCGAGGAACACATCGCCGACGC GGTCTCCAAGGGCGCCAAGGTGGTTTCCGGCGGCAAGCCGCACGCCCTCGGCGGCACCTTCTTCGAGCCGACCATCCTGG TCGACGTGCCGAAGAACGCCCTGGTGTCCAAGGACGAGACTTTCGGCCCGCTGGCGCCGGTGTTCCGCTTCAAGGACGAG GCCGAGGTCATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCGTCCTACTTCTACGCCCGCGACCTGGCCCGCGTGTT CCGCGTCGCCGAGCAACTGGAGTACGGCATGGTCGGCATCAACACCGGCCTGATCTCCAACGAAGTGGCGCCGTTCGGCG GCATCAAGGCCTCGGGCCTGGGCCGCGAAGGCTCCAAGTACGGGATCGAGGACTACCTCGAGATCAAGTACCTCTGCCTG GGCGGTATCTGA Protein sequence : MQLKDAKLFRQQAYVDGAWVDADNGQTIKVNNPATGEIIGSVPKMGAAETRRAIEAADKALPAWRALTAKERANKLRRWF DLMIENQDDLARLMTIEQGKPLAEAKGEIAYAASFLEWFGEEAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPS AMITRKAGPALAAGCTMVLKPASQTPYSALALAELAERAGIPKGVFSVVTGSAGEVGGELTSNPIVRKLTFTGSTEIGRQ LMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRLYVQDGVYDAFVDKLKAAVAKLNIGN GLEAGVTTGPLIDAKAVTKVEEHIADAVSKGAKVVSGGKPHALGGTFFEPTILVDVPKNALVSKDETFGPLAPVFRFKDE AEVIAMSNDTEFGLASYFYARDLARVFRVAEQLEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCL GGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-167 | 69 |
