Gene Information

Name : NCGM2_3103 (NCGM2_3103)
Accession : YP_005981336.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3309594 - 3310169 bp
Length : 576 bp
Strand : -
Note : similar to GI:116050066; similar to PA14_37080 of P. aeruginosa UCBPP-PA14

DNA sequence :
TTGCCGCTTGCCGAGCGGATTGAAGCCATCAACCGGATCCGCCGGCTGCTCCACGCGCACAGTCCGTTCGCCGAAGAGCC
GGTCGATTGCGTGCAGTGGGTGCGTGCCGAGCGCGTCGCCGGCAACGACTACAACCCCAATACCGTCGCGCCGCCGGAGA
TGCGACTGCTGAGGCTGTCCATCGAGTCCGACGGATTCACCCAGCCCATCGTCGCCTATCCGCAGGCCGACGGGCGCTAC
GAGGTGGTCGACGGCTTTCACCGCCTGCGCGTGGGCAGCGCCAAGGGCGCGCTGCGCCAGCGTTTGCACGGCTACCTGCC
GATCGCCGCGATACGCGCCGGGCGTGAAGGCGACAGCGAGCGCATCGCCGCCACCATCCGCCACAACCGAGCACGCGGCG
TGCACGGCGTATTGCCGATGACGGCGATCGTGGTGACCCTGCTCAAGGCCGGCTGGAGCGAGGCCGACGTGGCCCGCGAA
CTGGGCATGGACAATGACGAGGTGCTGCGTTTCAAGCAGGTTTCCGGATTGCCCGAGCTGTTCCGCGAACACGTGTATTC
CCGCTCCTGGGAGTAG

Protein sequence :
MPLAERIEAINRIRRLLHAHSPFAEEPVDCVQWVRAERVAGNDYNPNTVAPPEMRLLRLSIESDGFTQPIVAYPQADGRY
EVVDGFHRLRVGSAKGALRQRLHGYLPIAAIRAGREGDSERIAATIRHNRARGVHGVLPMTAIVVTLLKAGWSEADVARE
LGMDNDEVLRFKQVSGLPELFREHVYSRSWE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 2e-43 55
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 8e-43 55
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 8e-43 55
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 2e-43 55
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 6e-44 55
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 2e-40 53
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 2e-40 53
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-31 52
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-31 52
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-31 52
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 3e-31 48
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 3e-31 45
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 4e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NCGM2_3103 YP_005981336.1 hypothetical protein VFG1505 Protein 2e-44 55