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Name : NCGM2_2719 (NCGM2_2719) Accession : YP_005980956.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Unknown Product : putative ATP-binding component of ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 2894044 - 2895654 bp Length : 1611 bp Strand : - Note : similar to GI:116049757; similar to PA14_41160 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGAGCGAGAACATTCTGGAAATCCGCGACCTCGCCGTCGAGTTCCTCTCCGGCGAGCAACGCCAGCGGGTGGTCGAAGG CGTCAGCTTCGACATCCGCCAGGGCGAGACCCTGGCCCTGGTCGGCGAAAGCGGCTCGGGCAAGTCGGTGACCGCCCACT CGATCCTGCGCCTGCTGCCCTACTCCGTCGCCAGCCACCCAGCAGGCAGCATCCACTACCAGGGCGAGGATCTGCTCAAG CTCCCGGAACGGCGCCTGCGCGGGATCCGCGGCAACCGCATCGCCATGGTCTTCCAGGAACCCATGACCTCGCTCAATCC GCTGCATACCATCGAGAAGCAGCTCGCCGAGGTCCTCGCCCTGCACAAGGGCCTGGGTGGCGCCAAGGCCAGCGCGAGAA TTCTCGAACTGCTCGAGCTGGTCGGCATCCCCGAGCCAGCCAAGCGCCTGAAAGCCTATCCACACGAACTCTCCGGCGGC CAGCGGCAGCGGGTGATGATCGCCATGGCCCTGGCCTGCGAGCCGCAACTGCTGATCGCCGACGAACCGACCACCGCGCT CGACGTCACCGTCCAGTTGAAGATCCTCGATCTGCTCAAGGACCTGCAGGCACGCCTGGGCATGTCCCTGCTGCTGATCA CCCACGACCTCAACCTGGTCCGGCGCATCGCCCACCGCGTCTGCGTCATGCAACAAGGGCGGATCGTCGAGCAGGCTTCC TGCCAGGAACTCTTCGCAGCCCCGCGACACCCCTATACCCGCGAGCTGCTCAACGCCGAGCCCAGCGGTGCGCCGGCAAG CAACCCGCCCGGTGAAACCCTGTTGGCGGTGGACGACCTGCGGGTCTGGTTCCCGATCCGCAAAGGCGTGTTCCGCCGCA CCGTGGACCACGTCAAGGCGGTCGACGGGGTCAATTTCGAACTACCCCGCGGGCAGACGCTGGGCATCGTTGGCGAAAGC GGCTCGGGCAAGTCGACCCTTGGCCTGGCAATCCTGCGGCTGCTGGAAAGCCAGGGCGGCATCCGCTTCGAAGGCACCCG GCTGGACGGCCTCGCGCAACATGACGTGCGCCCGCTGCGGCGTGAGATGCAGGTGGTGTTCCAGGACCCGTATGGCAGCC TCAGCCCACGCATGTGTGTCGGCGAGATCGTCGGCGAAGGCCTGCGCATCCATAGGATCGGCAGCGAGGCCGAACAGGAG CAGGCGATCATCGACGCGCTGGTGGAGGTCGGGCTCGATCCGCAGACCCGCTACCGTTACCCCCACGAATTCTCCGGCGG CCAGCGCCAGCGCATCGCCATCGCCCGGGCACTGGTGCTGAAACCGGCACTGATCCTGCTCGACGAACCGACCTCGGCGC TCGACCGCACCGTGCAGCGCCAGGTCGTGGAATTGCTGCGGCAACTGCAGGGCAAGTACAACCTCACCTACCTGTTCATC AGCCACGACCTGGCGGTAGTCAAGGCGCTCAGCCACCAGTTGATGGTGGTTCGACATGGCAAGGTAGTGGAACAGGGCAG CGCCGAAGCGGTTTTCGCCTCGCCGCAACATCCCTATACGCAGCAATTGCTGGAGGCCGCCTTCATGGCCCCGGCAAGCG CGGAAAACTGA Protein sequence : MSENILEIRDLAVEFLSGEQRQRVVEGVSFDIRQGETLALVGESGSGKSVTAHSILRLLPYSVASHPAGSIHYQGEDLLK LPERRLRGIRGNRIAMVFQEPMTSLNPLHTIEKQLAEVLALHKGLGGAKASARILELLELVGIPEPAKRLKAYPHELSGG QRQRVMIAMALACEPQLLIADEPTTALDVTVQLKILDLLKDLQARLGMSLLLITHDLNLVRRIAHRVCVMQQGRIVEQAS CQELFAAPRHPYTRELLNAEPSGAPASNPPGETLLAVDDLRVWFPIRKGVFRRTVDHVKAVDGVNFELPRGQTLGIVGES GSGKSTLGLAILRLLESQGGIRFEGTRLDGLAQHDVRPLRREMQVVFQDPYGSLSPRMCVGEIVGEGLRIHRIGSEAEQE QAIIDALVEVGLDPQTRYRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRQLQGKYNLTYLFI SHDLAVVKALSHQLMVVRHGKVVEQGSAEAVFASPQHPYTQQLLEAAFMAPASAEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-76 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-76 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-76 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-76 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-93 | 43 |
