Gene Information

Name : NCGM2_2709 (NCGM2_2709)
Accession : YP_005980947.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2883725 - 2884432 bp
Length : 708 bp
Strand : -
Note : similar to GI:116049749; similar to PA14_41260 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGGACTGCCCTACCCTCAGCAAGGTATTGCTCGTCGAAGACGACCAGAAGCTCGCCCGCCTGATTGCCAGCTTCCTTTC
CCAGCATGGTTTCGAAGTGCGCCAGGTGCATCGCGGTGATGCCGCGTTCGCCGCTTTCCTCGACTTCAAGCCGCAAGTGG
TGGTTCTCGACCTCATGCTCCCCGGACAGAATGGTCTGCAGGTGTGCCGGGAGATCCGCCGGGTCGCGAACCTGCCGATC
CTCATACTCACCGCCCAGGAGGACGATCTTGATCACATCCTCGGCCTGGAGTCCGGCGCCGACGACTACGTGATCAAGCC
GATCGAGCCACCGGTGCTGCTCGCCCGCCTGCGCGCCCTGATGCGCCGGCACGCGCCCCTTCCCGCCTCCCCGGAAAGCC
TGACATTCGGCAAGCTGAACATCGACCGACGGCGGCGCGAAGCGGAACTCGAAGGCCGCGGCATAGAACTGACCACGATG
GAGTTCGAGCTGCTCTGGCTGCTGGCCAACCAGGCAGGGGAAATACTTTCCCGCGACGAGATCCTCAACCAGATCCGCGG
CATCGGCTTCGACGGCCTGAACCGCAGCGTCGACGTCTGCATCAGCAAGCTGCGCAATAAACTGAAGGACAATCCGCGCG
AGCCGGTCCGGATCAAGACCGTCTGGGGCAAGGGCTACCTGTTCAACCCGCTGGGCTGGGAACTCTGA

Protein sequence :
MDCPTLSKVLLVEDDQKLARLIASFLSQHGFEVRQVHRGDAAFAAFLDFKPQVVVLDLMLPGQNGLQVCREIRRVANLPI
LILTAQEDDLDHILGLESGADDYVIKPIEPPVLLARLRALMRRHAPLPASPESLTFGKLNIDRRRREAELEGRGIELTTM
EFELLWLLANQAGEILSRDEILNQIRGIGFDGLNRSVDVCISKLRNKLKDNPREPVRIKTVWGKGYLFNPLGWEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NCGM2_2709 YP_005980947.1 putative two-component response regulator CP000034.1.gene3671. Protein 4e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NCGM2_2709 YP_005980947.1 putative two-component response regulator VFG0596 Protein 2e-21 41