Gene Information

Name : hcpD (NCGM2_0270)
Accession : YP_005978547.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : secreted protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 296633 - 297151 bp
Length : 519 bp
Strand : -
Note : similar to GI:116049604; similar to PA14_43070 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGGCAACCCCCGCCTATATGTCCATCACCGGCACCAAGCAGGGCCTGATCACCGCCGGCGCCTTCACTGAGGACTCGGT
CGGCAACACCTACCAGGAAGGCCACGAGGACCAGGTGATGGTCCAGGGCTTCAACCACGAAGTGATCATCCCGCGCGACC
CGCAGTCCGGCCAGCCGACCGGCCAGCGCGTGCACAAGCCGGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCCGCTG
CTGCTGGCCGCCCTGACCTCCGGCGAGCGCCTGACCAAGGTCGAGATCCAGTGGTACCGCACCTCCGCCGCCGGCACCCA
GGAGCACTACTACACCACCGTCCTGGAAGACGCGATCATCGTCGACATCAAGGACTACATGCATAACTGCCAGGACCCGG
GCAACGCCCACTTCACCCACCTGGAAGACGTGCACTTCACCTACCGCAAGATCACCTGGACCCACGAAGTCTCCGGCACC
TCCGGCTCCGACGACTGGCGCTCGCCGGTCGCAGGGTGA

Protein sequence :
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPL
LLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGT
SGSDDWRSPVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec16 YP_851428.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-48 60
aec16 AAQ96710.1 Aec16 Not tested AGI-1 Protein 3e-48 60
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 7e-44 58