Gene Information

Name : pscK (NCGM2_2623)
Accession : YP_005980866.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : PscK type III export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2796897 - 2797517 bp
Length : 621 bp
Strand : +
Note : similar to GI:116049674; similar to PA14_42260 of P. aeruginosa UCBPP-PA14

DNA sequence : 
ATGCCATTGACGGCCTACCAGTTGCGCTTCTGCCCGGCCCGCTACATCCACGAGTCGCACTTGCCCGCGGTATTGCTGCG
GTTGCTGCCGGCGCTGCCGGACTGGCGGCGACAGAGCGTTCTCAACGCCTGGCTGCTGGAGCAGCTGGAACTGGACTGCG
CGTTCCGCATGCCCGCGCAACTGGGTGGGCTGGCCCTTTACCCGCAGGCGGCGCTGGAACGGACCCTGGGCTGGCTCGGC
GCGCTGCTGCACGGCCAGGCCTTGCGGCAGGTGCTGGACGGTGCGCGGGTACGGCGCATCCGCGCGCAGATCGGCGAACA
GGGCCAGCGCTTCTGCCTGGAGCAGCTCGACCTGCTCATCGGTCGCTGGCCGCCCGGCTGGCAGCGGGCCTTGCCGGAAA
ACCCGGAAGACGGCTATTTCCGGCGCTGCGGCCTGGCTTTCTGGCTGGCCGCCTGTAGCGATGCCGACTGCGGTTTCTCG
CGGCGCCTGCGCCTGCGTCTGGAGGCCATGCCGGCCCCGGCGGACTGGACCTTCGACGAACAACGGCGATCCCTGGCGCG
GACCCTGTGCCTGAAGGTCGCCCGACAAGCGAGCGATGAATGCTTCCATTTGTTGAACTAG

Protein sequence : 
MPLTAYQLRFCPARYIHESHLPAVLLRLLPALPDWRRQSVLNAWLLEQLELDCAFRMPAQLGGLALYPQAALERTLGWLG
ALLHGQALRQVLDGARVRRIRAQIGEQGQRFCLEQLDLLIGRWPPGWQRALPENPEDGYFRRCGLAFWLAACSDADCGFS
RRLRLRLEAMPAPADWTFDEQRRSLARTLCLKVARQASDECFHLLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscK AAO18026.1 LscK Virulence TTSS locus Protein 8e-46 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscK YP_005980866.1 PscK type III export protein VFG0219 Protein 5e-79 99
pscK YP_005980866.1 PscK type III export protein VFG0410 Protein 1e-26 41