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Name : pscJ (NCGM2_2622) Accession : YP_005980865.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Virulence Product : pscJ type III export protein Function : - COG functional category : - COG ID : - EC number : - Position : 2796154 - 2796888 bp Length : 735 bp Strand : + Note : similar to GI:116049673; similar to PA14_42270 of P. aeruginosa UCBPP-PA14 DNA sequence : GTGAAAGGTCTGTCGCGCATGGCGCTCCTGGCGCTGGTCCTGGCGTTGGGCGGGTGCAAGGTCGAACTCTATACCGGGAT CAGCCAGAAGGAAGGCAACGAGATGCTGGCGCTGTTGCGTTCGGAGGGCGTTTCCGCGGACAAGCAGGCGGACAAGGATG GCACCGTGCGCCTGCTGGTGGAGGAGTCGGATATCGCCGAGGCGGTGGAGGTGCTCAAGCGCAAGGGCTATCCGCGGGAG AACTTCTCCACGCTGAAGGATGTGTTTCCCAAGGACGGGCTGATTTCCTCGCCCATCGAAGAGCGCGCGCGGCTCAACTA CGCCAAGGCCCAGGAGATTTCCCATACCCTTTCCGAGATCGATGGCGTGCTGGTGGCGCGGGTCCATGTGGTGCTGCCCG AGGAGCGCGACGGACTGGGCAGGAAGTCCTCGCCGGCATCGGCCTCGGTGTTCATCAAGCACGCCGCCGACGTGCAACTG GATGCCTACGTGCCGCAGATCAAGCAACTGGTGAACAACGGCATCGAAGGCCTCAGCTACGACCGCATCAGCGTGGTGCT GGTGCCGTCGGCCGGGGTCCGCCAGGTCCCGCTGGCGCCACGCTTCGAGAGTGTCTTCTCGATCCAGGTGGCGGAGCACT CGCGCGGACGCCTGCTCGGTCTGTTCGGCCTGCTGCTGGCGTTGCTGCTGGCGAGCAACCTGGCGCAGTTCTTCTGGCAC CGGCAACGGGGCTGA Protein sequence : MKGLSRMALLALVLALGGCKVELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKGYPRE NFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEERDGLGRKSSPASASVFIKHAADVQL DAYVPQIKQLVNNGIEGLSYDRISVVLVPSAGVRQVPLAPRFESVFSIQVAEHSRGRLLGLFGLLLALLLASNLAQFFWH RQRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 2e-79 | 82 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 3e-29 | 43 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 4e-28 | 42 |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 4e-27 | 42 |
| XC_3009 | YP_244077.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 2e-35 | 42 |
| hrcJ | NP_636607.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 2e-35 | 42 |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 2e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pscJ | YP_005980865.1 | pscJ type III export protein | VFG0218 | Protein | 1e-91 | 99 |
| pscJ | YP_005980865.1 | pscJ type III export protein | VFG0409 | Protein | 1e-71 | 77 |
| pscJ | YP_005980865.1 | pscJ type III export protein | VFG0051 | Protein | 6e-36 | 46 |
