Gene Information

Name : pscI (NCGM2_2621)
Accession : YP_005980864.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : type III export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2795822 - 2796145 bp
Length : 324 bp
Strand : +
Note : similar to GI:116049672; similar to PA14_42280 of P. aeruginosa UCBPP-PA14

DNA sequence : 
ATGGGCGCCCAGGCGCAGATCACCAGTCTCGAAGAACTCTCCGGCGGCCCGGCCGGCGCGGCCCACGTCGCCGAGTTCGA
ACGGGCGATGGGCGGTGCCGGCAGCCTGGGCGGCGACCTGCTCAGCGAACTGGGGCAGATCAGGGAGCGTTTCAGCCAGG
CCAAGCAGGAGTTGCAGGTGGAGCTGTCGACGCCCGGCGACGATCCCAACAGCCTGATGCAGATGCAGTGGTCGCTGATG
CGCATCACCATGCAGGAAGAGCTGATCGCCAAGACCGTCGGGCGCATGAGCCAGAACGTCGAAACCCTGATGAAGACCCA
ATGA

Protein sequence : 
MGAQAQITSLEELSGGPAGAAHVAEFERAMGGAGSLGGDLLSELGQIRERFSQAKQELQVELSTPGDDPNSLMQMQWSLM
RITMQEELIAKTVGRMSQNVETLMKTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscI AAO18028.1 LscI Virulence TTSS locus Protein 8e-25 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscI YP_005980864.1 type III export protein VFG0217 Protein 1e-35 99
pscI YP_005980864.1 type III export protein VFG0408 Protein 8e-17 47